Detailed information of Acti_004854-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_004854-T1LYSINE-SPECIFIC DEMETHYLASEScLC4GM_641985609719921157-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF21322KDM6_C-helLysine-specific demethylase 6/UTY, C-terminal helical domainDomainInterproscan
PF21326KDM6_GATALKDM6, GATA-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR046941Homologous_superfamilyLysine-specific demethylase 6, GATA-like domain superfamilyInterproscan
IPR048560DomainLysine-specific demethylase 6A/B-like, GATA-likeInterproscan
IPR048562DomainLysine-specific demethylase 6A/B-like, C-terminal helical domainInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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