Gene detail

Detailed information of Acti_004542-T2 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_004542-T2	CYTOCHROME P450 FAMILY 3	ScLC4GM_64	11354605	11399862	+

Gene Structure

More details in Jbrowse Sequence

CDS

Acti_004542-T2

Transcript

Acti_004542-T2

ATGGAGTTTTTGGTGGCTCTAGGTAGCAAACTCGTTCAGTTTTTGCTGACCCATTGGACCACATTGTTCATCGCGTTGTTCGTTCTAGCTGTACTCTACTGGAATGGAACTCAAGCTTCGAGGGCACTCGAGTCTCGATTCCCAGATCTTTCAGGACCCAAACCCTGGCCATTTCTCTATAACATACCAGACGCGTTCAGTGTCGGTGGTGAAATCCATTTGCTGTTTGATCGATATCACAAACAATATGGCGGCCAAGTTTACACATTCAGTTTCTTAAAGCTTCCAAGTTTGGTGGTGAGTGATCCAGAGATGGTGAAGGCTGTGTTGGTCAAGAACTTCGACTGCTTCCACAACAGACCGGAAGTGTTCACCTTACCAAAGCCATTGGATCTCGTACTTACTGTAGTGAGGGGAGAACACTGGAGACGTATTCGTAACACTTTGTCGCCAACCTTTAGTGCTCATAAACTGAAAGCAATGATTCCACTGATGAACATGTCATGTGACACACTATTGAAGAAAATAGACGAGGTGGCTGAATCAGGGAAAAGCTTTGACATGCTCAGTTACCAGCAGGCAGTCACTCTTGAGGTCATCATCTCCTCCGTGTTTGGTGTCCAGTCAGAATGCCAGACAAACCCAGATGACCCTGTCATGGCCAAAGCAATTTCCACAATGCAACCAAGTACCATACTACAAATCATCGGCAACTTTATTCTACCACTATTTCCATATGGAGAGAGGTTTCCAGCGACCAATCTCGGAGGGCGTATATTTTTTAACCCTATGTTGGAATTAACTAGTTTTGTAAAAAAAGTTGTTGATGCGAGGAAAAAGGAGGGCTCGATAAGAAAAGACATTTTAGACTTGATGCTCAACGCTTCCAACTCCAGCAGCGAAAACAAAAAACTAACAGACGAGGAGGTTGTTGCACAGTGCATCGGATTCCTACTCGCGGGGTTCTTTCTGGTACGCGAATGTGCAAAGGATTGTACCATCAAAGGCATCAACATCCCACATGGAACACCAATAATAATACCTGTCTACACTGTACTCTACTGGAATGGAACTCAAGCTTCGAGGGCACTCGTGTCTCGATTCCCAGATCTTCCAGGACCCAAACCCTGGCCATTTCTCTATAACATACCAGACGCGTTCAGTGTCGGTGGTGAAATCCATTTGCTGTTTGATCGATATCACAAACAATATGGCGGCCAAGTTTACACATTCAATTTCTCGAAGCTTCCAAGTTTGGTGGTGAGTGATCCAGAGATGGTGAAGGCTGTGTTGGTCAAGAACTTCGACTGCTTCCACAACAGGCCGGAATTGTTCATGTTTATCGTACCAGAGCCATTGGACCTTATACTTTTTGTAGCGAGGGGAGAACACTGGAGACGTATTCGTAACACTTTGTCGCCAAACTTTAGTTCTCATAAACTGAAAGCAATGGTTCCACTGGTGAACATGTCATGTGACACACTATTGAAGAAAATAGACGAGGTATCTGAATCAGGGAAAAGCTTTGACATACTCAGTTATCAGCAAGCAGTTACTCTTGAGGTAATCATCTCCTCCGTGTTTGGTGTCCAGTCAGAATGCCAGACAAATCCAGATGATCCTGTCATGGTCAAAGCAATTGCCATAATGCGACCAAGTATCATCAAGCAAATCATCAGCAACTTTATTCTACCACTATTTCCATATGGAGAGCGGTTTCCAGCGACCAATCTCGGAGGGCGTATATTTTTTAATCAAATGTTGGAATTAACTAGTTTTGTAAAAGACGTTGTTGTTGCGAGGAAAAAGGAGGGCTCGATAAGAAAAGACATTTTAGACTTGATGCTTAACGCTTCCAACTCCAGCAGCGAAAACAAAAAACTAACAGACGCCGAAGTTGTTGTACAGTGCATCGGATTCTTACTGGCGGGTTACGAGACATCTAGCACCACCCTTGGCTTTGTCTGTTATCACCTAGCAACCAATCCTGACGTCCAGGACAAACTGCAACAAGAGATTGACAGCGTATGGACTGATGAGGACAAGATGCCATTGTACGACACAGTACATGAACTGCCCTACCTGGAAATGGTCATATCAGAGACTCTAAGACTCTACCCACCAGGGTTCTTTCTGTTGCGCGAATGTGCAAAGGATTGTACCATCAAAGGCATCAACATCCCACATGGAACACCAATAGTAATACCTGTCTACAGTATCCACAGGGATCCCAAGAACTACCCTGACCCAGAAACGTTTGACCCAGAGAGGTTCAGCGCCGAAGCCAAACAGTCACGTGACCCGTACACGTACCTCCCGTTTGGCCATGGACCCCGCAACTGTATTGGTATGAGGTTAGCACAGATGGAAATGAAACTTGTACTCGTGAGGATATTAAAGAAGTACTCGTTTAGAAAGACACCAGAAACAATCATTCCACCAAAGGCATCGTCAAGATCTACGCTAACTGCTTTGGATGGTATCACCCTTGGGCGGAGAAGTCCTGGTGCTGAAATACAGCCGCTGACCAGGCTGAGCCTGCTCATCTCGAATCAAACCAAAATGTTTCAGTTTATGTTGTTGTTCAGCCGACAAGGCAAGATCAGGCTACAGAAATGGTACACCGCGAGTACACAGAAAGAGAAGAACAAGATAATGCGTGACTTGGTGACTACTGTCCTCTCTAGAAAACCGAAAATGTGCAGTTTTTTAGAGTACAAAGATCTCAAAGTCTGCTACAAAAGATATGCCAGCTTGTATTTCTGTGTTGGTGTAGAAAATGATGACAATGAGCTTCTAACACTGGAAGTCATCCATAGATATGTAGAACTGTTGGATAAATATTTTGGAAGTGTATGTGAACTGGACATAATATTCAACTTTGAAAAGGCTTACTTCATGTTGGATGAGCTGATCCTGGGAGGTGAAATGCAGGAAACTAGTAAAAAGAATGTCCTCAAGGCAATATCAGCACAGGATCTGCTACAAGAGCAATTGGAGCTTCAACAAACACTCGAGGACTTGGGACTGTCGTGAAGATGGCATGATTACTCACTACCTTGTAAGATTCTACCATGATAATAATAATATTAACAGACTAATATTCTTTAACAACCTATACTCTCAATTATATATGTTATATATCTTCTATGAATCCTGTAATATCATATCTTAATATTTACCAAGCCAGAAAATACTGAGTTCTAGGCACAACATATTCTGGAGGTACTAACATACACTCATGATTGTAAACTGCACAACAGCACTTTGTGCCACAATAGCAGTCCTCACTTGCAAAACAAATTTGAATTAACCTCAAGGGTAGCCCAATTTAAGATTTGCCTATTGCAGTTTTGCGTGCAGAAGGGGCTACATTTGAAAAGTTATATAGAATTTGTTCAATATAAATGAATACCTTTACATGAAAGTGGTATTTCACATATGAAATATAAAAAAAAATACACAGATGCGATGTAATCATTTTGTTGTGCCTAAAACCTGGTACTTTGTAACTTGGTGAATAATAATCAAATGCTGATGTGGCAGTTTGAAAATACGGTTTTATCTTCTTGAGTGAATTTGTTGTAACACACTTGTTCACATCTACCACTCAAAGATAAAAATCTCTGTATGGCCATTTATATCCTCTATGTATTGCTAAACTTTTTGGGATTTTTGTCTTCACCCTTTGACAGAATGGATTTGAAAGTACTAATTTCTATTAACATTATTACAGACCTGTGCTGACTTTGATCGAGTTCTAAATTCTCCCAGTTGTAGGCAATCATTTCATCTGTCCACAGAAGGAGAATTTAAAACTTGATCAAGGTCACTTATGTAGTACTTCTTGCATATCTTCATTGTTGGTAGCTGACTCCACTCGGGTTAATATTTGAGATGCATTTGATTTTGTTTCTTATTTAACAAGATTAAAACGAAGGGTAAGTGTGACAAAATCACTGCAAAAAATATTTTGTTTACCACAAAAAAGGTTATGAGAATATTATTGAATTCTGCTAAATGATTTGGTATTCTGTCAAAGTGTGACTACTCAAATTATCATAACCCAACTGCAATTTATTGGCAAACTCGCCATCTAATTGGCTAGTCAGGCACTCTCTATCGATAGCATAACCCAGCCGCCGTCTATTGACAAACTCGCCATCTAATTGGCAAGTCAGGCGTAGTCTATAAAACCATAGCATTGCGTGCGCTGCAGACAAAAATCACTTAGAACAATGCTTTGTTGTGAGTTTTTCAGTTTTTTTCTGGGTTCGTTAATGCCAAAACAATTAGACATCTCACTCTTGGTTTAATTTCTATCATCTTTAATAGTTTGCGCCCAATAGAAACCTCGAGTTTGCAGTCTAATTGTTAAATTATACTGTATACAGTGGAAACTCTCGGGCACCACCTCTCTTTAAGGCTTGGTTACACTAGGGATGCCCTTGTGCACCTGTAAGTTACACCGCGGCAAAACGTCACGCGCATGCGTATTTCTTGTTGGCGCGCGGCCGCCCCCAGTTTCCCGCGAAAACTGAAATGAAACAACAGGCACATACCCGTGATTTTAAAAGTATCCATTTGTGAACTGTTTTGTCAAAAATAAGATAAGCCTAAGACTTTAACAGGTTGAAGTTTTCTTAATTTGTAATTCACTGTTCACTAAGTTATAAAATTATTTAGTAAAAAAGTTTAAGCCCTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan
PF01217	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR011012	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR022775	Domain	AP complex, mu/sigma subunit	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR044733	Family	AP-1 complex subunit sigma	Interproscan
IPR050705	Family	Cytochrome P450 3A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24302	CYTOCHROME P450 FAMILY 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0008395	Molecular Function	steroid hydroxylase activity	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0030121	Cellular Component	AP-1 adaptor complex	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-