Gene detail

Detailed information of Acti_004124-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_004124-T1	ACYL-COA DEHYDROGENASE	ScLC4GM_42	233664	292399	-

Gene Structure

More details in Jbrowse Sequence

CDS

Acti_004124-T1

ATGCACGGGAATCAGTCAGGACCGGTGATCTGCGAAGCGACTCTCACAGCCGATCGGATTGTAGGAGCATTAGGTGAGTTTCCTCTTGCGGCTCACGAGGTGATTGACCCGTTCTTCTTACTACTGACTTCTGCATGCTGGAATGGCGTTGCCATGGGTTGCATTGACGTCACAAGAAAGCACGTGACCACCAAGCAACACTCAGATCTTGGCATGCACATAGCAGATTATACCATTATTCAGGATTACGTTGGCGAAGGAATCATCGAAACTAACGCGTCACGCACTCTCCTGTTCAGCGTCGCCCAGGCGATGGATAATGTGACCAACAACAACGATTGGAGTATCTATGGCAACGGCGCAAGCCATATTCCGAGACGAGGTATGCTCCATCATTGGTGTTTCCAAGTAAAGGTCAAGGCAGCAGCTGTTTCAGGATTTGTTAGTGAGAAGATGTTACATGCTTGTGGAGGGGCAGGGTACAAAACAGATCTAGGACTCGAAAGGCTCTACAGGGACAGTAAAGCTGGTTGGCTGATGGGAGCCAGTAACGAGGTGCTGAGAGAAATCATTGGCAAGACGGCACTGTTTGGGTTACAAGCACTTGATATATGGTGGAAAGCTCCAAACAAGAAAGTCATCACAGCCGAAGTTAGAAAACTAACAATGGACGATAAGGAATCACTTGCTAAAAAGCTACTCGAAGAGGTTGAAATGGAGAAAAAGAGCAAAGATAGACTCAAAACCTACCAGGATTCAGAGTTTGACAATCCATTCAATACAGTTCCCGCTGCCAAGAAAGGCCCATACGTTGATGTCGATGGCAACAAACACAAACCAGCCCTGAACCCAGACACCTATACTCCACTTAAACTGGAGGCCAGAAATATCCTATGGGGAGAGGTGGCGGAATACAGGTTCTCCCTACCCCACCCTACTGATCACATCGGTTGTTTTGCTGGTCAGTATGTTAAGGTTAAGGTGTTCTCTGATGGACCAGGAAGTGTTGCGTACGAGAGGAGTTTGTCTCCCGTATCATCCACGGTCGGGTACGGCGAGGTCATGGTAGTCCTTAAGCACGAGACCCACGGACCGCTGTCTAACAAGTTTCATGCTCTACAGTCAGTCATGCATTTGGCCGCCGTCGCAGCCTTGCTATTTCGCCACCATGGCAACGAAACGATCAAGAATCTTCTGCGTCGCCTTGACAACGAGAAGCTGGTCGGTACAGTGGTGTACAGTGATGCTGGGACTGGTGGCCATTTTTGGATTCCTCTGAGCTCCAAAGCCAAGATCTTCGATGATGGCCGCATACAGTTGCTAAGATATGGATCCTGGTCAACTAGTGCTGGATACGCGGACTGGTATGTCGTCTCGGGAATGAGTCCAAATTTGGCAGGGGACTTTTCGAAATCTTCCTGCTACCTTGTCTTTAAGGATGAAGTACGAGCCAGTGCTGACGACTGGTCGTCTCTCGGTATGCATGGCAACCAGTCAGGACCAGTGATTGCAGAGGGCCTGTTGACACCAGACAGAGTTGTAGGGCCTTTTGGCGACTTCGCCAACTCAGTCGGGGAAGGCGCTGCTGTCATTTTCTTCTTGTTGAGTAGCGCGTGCTGGAATGGTATTGCCATGGGCTGCATTGACATCACAAAGAAACACGTCACCACTAAACAGCACTCTGATCTTGGGAAGTTCGTTGCCGATTATGAAATTATCCAGGACTACGTCGGCGAGTGCATAATCGAGACAAATGCGTCGCGCCTTATGGCATTTAGCGTCGCTCAAGGGTTGGATCAAGCGACCAATGGCAATGACTGGAGTATGTATGCTGACGGGACACACGCCACCCGAAGCTTTAGGCTTTGTATGCTTCATTGGTGCACACAACTCAAAGCCAAATCGGCGGCCGTCGCTGCGTTCGTCAGTGAGAAGATGTTACATGCTTGTGGAGGGGCAGGGTACAAAACAGATCTTGGTTTGGAAAGACTCTACAGAGACAGCAAGGCAGGCTGGGTGATGTCAACAAGTAACGAAGTCGTCAGGCAACAGATTGGTTTTACGGCTCTTTATGGACTCAGCTCCCTCGATTTGTGGGCGAGAGTTCCAAATCACAAAGTCATCACAGCCGAAGTTAGAAAGCTAACAAGTGGCGAGAAGAAGGTACTGGCTGAAAAATTGTTGAAAGAGGCTGAGATTGAAGAAAAAAGTGCTGACCAGCAGCCCGAACCTTACCAGGATTCCGAGTTTGACAATCCATTTAATACAGTTCCCGCCGCCAAGAAAGGCCCATCCGTCGATGCAACTGGCATTGAACACAAACCAGCCCTGAACCCAGACACCTATACTCCACTTAAACTGGAGGCCAGAAAAATCCTATGGGGAGAGGTGGTGGAATACAAGTTCTCCTTACCTCACCCTACTGATCACCTCGGTTGTTTTTCTGGTCAGTACGTTAAGGTTAAGGTGTTCTCTAATGGACCAGGAAGTGTTGCGTATGAGAGAAGTTTGTCTCCCGTGTCATCTGCAGTCGGGTACGGCGAGGTCAGGGTAGTCCTGAAGCACGAGACACAAGGCCCGCTTTCTGACAAATTTCATGCTCTACAGTCAGGTAAATTTATAAATGTGCACCTTACTTGA

Transcript

Acti_004124-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF00970	FAD_binding_6	Oxidoreductase FAD-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008333	Domain	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43884	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0006552	Biological Process	L-leucine catabolic process	Interproscan
GO:0008470	Molecular Function	3-methylbutanoyl-CoA dehydrogenase activity	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-