Gene detail

Detailed information of Acti_001378-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_001378-T1	REGULATOR-RELATED	ScLC4GM_19	38262908	38273656	-

Gene Structure

More details in Jbrowse Sequence

CDS

Acti_001378-T1

Transcript

Acti_001378-T1

ATGGAGAAAGAGCACAGAGATATCCTAAGGAGAAACCGTGTAAAGTTGAAGCGCGACTTACTTGCTGAACGAATCTCTTCGGAGCTCTTTTCACGTGGAGTTATAGAGGAAGAAGATTTACACGAGGTACGAGCAAGACCAACACCAGAAAAACAAGCTGAAACATTACTAGACATGCTTCCCAAGCAAGGCCCTGGAGCGTTCTCCGGTTTCTATCAAGTGCTGAAACAATATTCTCCTCACTTGGCAAACCTCATTCAGCCTCGCAATGCTGGTTTCCAAGCTCTGAAGGAGTCTTACCTGCAGGCAGTCAGCTTACCATGCAAAGTTCACAATTTTGTTGGACGTTCAAAGCTGTGTGAAGAAATTGTTCAACTGACTACTGATATGTGTAGGCTGATCTTGATAGTGGGCCCCCCTGGCTGTGGAAAATCTTCTACTGCCACCATGGTTGGTCACATGCTGGAAAAAGAACATTCACGTGTGATGCACTTTCCATTACGAGGAGCCAAATCCATTACAGCGGCTGCTGTAGTAATGCTTGATGCTGTGGGTCAGATTATTGGGAACAATCCAGTTGCACAGTTGCAGCAGTTTCTACATTCCCTAGAGAGAGGAACGGTGGTCATTCTTGATAATACAGAGGACTTGCAGGAAAGTAGCAATGAAGAAGATTTTCTGAAGTTCCTAAAAAATGTTGGGGAGTATGCAAAGCACTTGTGCACTATCGTCACCACCACAAAGGCAGTCCATGATCTACCACTGTTCTCATTTCGTGCTGTATCAATTCCACTGAAGCCACTTGATGACGAGAACTCGATGTCACTGATGCGACTTCTTGTACCAGGTATCCCAGCAGCACTTGCGAAACGGTTAAGCAAGTGCTGTATGGGCGTACCTCTGCTGATGAGATTCATTGCATCGCTCATCAATAAGGGTGACAGAGCTACGTATGATTCTTTGATTCAAGAACTTGAAAAGAACCCGGAAGTGGTGTTCCAAGGGAATAACTCAAACTTTGGAAATTACTTCTGCCACTTAAGGTTGTTTTTAAACCGTCTGCCGAGAGATCTCAAGGAAGCCTTGGCACGTTTGGCAGTTTTTCCAACCAACTTCACCTCTGACAAAGCCCGGTTTCTTTTCCCAGAGGACACGAATGCGGTGAATTACTACTGCTATCTTTCTAGACTCGTGGATTATTCTCTTCTGAATTTAGATGAAACGAAATCAACCTACGAACTCCATCCACAGCTCCAAGCATTTTGTAGGGCTAAAATAGATGGCGTCGTGAGTGGCAGTTACGACATGGCTGTAAGACTATTCATCCAACATTACTTGTGTCTTCTGCAAGAGCTTCATACACAGTTTATAAGCCCAGAAAATAACATCGCCATAGACAGATATTCACAACATAAGAGGAACATCAACCATGCTTTAAAGCTTGCTGCAGAAGAAAAGTTCTTGAAGCATTTTGGGATTAAAGTGTCGACTGAGGTAGTGAACTTTCTTGCAAAGGTATTGAACATTCAAGAGTTTGAAGCAATTTACAACGACTTTGCAGAAAGTGCAAAATCGTTACAGGACAGAAAGATGTATAGCGACTGTCTGATGTCCCTCGGCTTCAAACTCCTCTGTTACCATGGTAAATCCAGTTCCCGTTATGAAGCTCGGGATGTGTTATACAAGGCTAGACAAGTTCAACTAATGCACGGAGATGTGGAGAGTGAACAAAGCGCTCACTGCCTGAGTAAGCTAGGCTTGTGCCTGGTGAGAGATGGTGATGTAGAGTTTGGAGTGCGTATGATTACCCAAGCGATCGTCATGAGAAAGAGATTAAGGACAGCACAGAATGGGCCAGTTCAAAGGATGCTAGTATCTGGGGGCTACTGTGATCTCGCAATGGCTCTGAGTACTGGGGGAAGGCATAAGGCAGCAGCGACGATCTGGTCAACCATCTGTCTTACAACATACCGTGAAATCCTAGGAAGTCACCCTTTTACAGCCACCTTATTGCAGTATATTGGTGATGCTTATCATAAGATGGAGCAGTACAGCCAGGCTGAAAAGTTCAAAAGACAGTCAGTGAACATGCGTAAGAGTTTGCTAACCAACCATCACCCAGACAGTGCGCGGTCGTTCTTCTGTTTGGCACAGACTCTAATGGCCATTGGCAAGCATGATGAAGCACTAGAAATGCTGAGAAATACCCTGCATATCCAGACACGAGTACTGGCATCCCCTGGGGATATCAAGAACACGAAGAAAGAGATTAAGCGCATTGCTGAGATTTGTCAGGGCCCGGAGTCGTTGTGCAGTGGGATGAAAGCTTGCCACATTGGCAATAGATTGGAACATAGATGCGAATCCGACGGTGCCATAGACTCGGGTAACTACAGAACTGAAGAGGGGAGGATACCTTCGTTGTAAACATGCATGCCATATTGGTATGTTGAACATCAACTAACAAACTAACTGCCAGTTTGTATAGTATTTCCTTGATTCACCAAACAAAGGAATGCTGAGAACTTCACTTTGAGGACTAAGAAACGTACGTGAAAAATGAATTTTCTAAACTATAATCATAGTATAATTTAAACAAAGGTTAGCATATAACTCTCTCCTCGGCGGACACGAACTTTCAATGATAATATTCCGGCAAGGAATTCTTATTTCGTTTTTAAAGAAACGGTAAAAATATAACTTCGTTGAAGACAAATGCGAAGTGTTTCAGTGCCATATACAACAACAACGATTTATTCGTACCATGAAATAGTAAATGTAGCATGCATCTGAAACATTTTTAAAACCCATTTTGTAGTTCACTACATTTTGTCGACTGAATTTACAACTGACAGTTTGCAATAGTAGACAAGGCAATAGCTGATATTACAGTCGCGTCTACGAATACAAGTTTCAGCGATAGTGACCCGAACGCCTCACTTCGACGTAATGAAGCGCCATTAAAACCATCATTCTTGCATGACACCAACACTCTATTACACAAGCACGACTAGTTTAGATACACAGTTTGAATAGCGCTCATTACATCGAAGTGAGGTGTTTGGGTCAATAGAGCTGAAACTGCTATTCCTGGACGCCACTATAATAGCTATTACTATCAAAATACACGGCCAAGTATAAAACCGCCCTCATGAAAATGCGCGCGTATATCCGGCTACAAACAACCTCTGGCCGGCTGCAAATGCCTTTTCAGCCCATTTTCAGCCCTGTATCTCAGTCTCTTGCCTCATCGTCCTATCCATTTCGTCCTATCCATTCGAGTGCAAATCCTGTCAGCGAGTTCGCGCCAGCGAGTAATTTTGAAAAGTTTGGAGCACTCGCGGAACCTCATCCATAGCAATACGCAAAAAAGAAAAGATATCGGTGAAAACTTTGAAGAGGAAAAACAAATGCCAGAATTCATTTGGCCTTGTATTATGATAATAGTCACAACGCTCGGGCCGCAAATGGTACTACGCGGGATTAAAAAAATCCATCCAAAAGTCATTTTATTCTCTTATTGTATATACACTTTATCACTCAACTTGGTGTTTGGAACTAACCAGAGCATTGCAAAAATCGCGTTTTGTTGCGGCAAATCTCCGAGTTCATGCACATGAAAAGATGTCGTGACTTTTCGGCTTCGGTAACAAGTAGTTTGTGTTATAAGGAAACAAAACAAATGTCACGCCATTGTCGATCTATATATTGATTCAGTATATACCACTCAAGGGAATAGTGCTTTTCGCGCGCTTTGATTGCCTACTCCAGAGGTGATATATTTTGCTATTCACCTCCGAGCGAAGTAGCGATCACCTCGCGCGTGTTTTTGTCGATTTGACAGAATAACTATTTGGTGCTGGCTATTCACTTGTGTGGTATATACTAAAACAATTACTGTATTCACCTCAGTGTCGGTGAAAAGTGGTGGATATTTACCTCGCCGTGGCTCGGTAAATATCTACCACTATTCACCGACACTTGAGGTGAATAATTGTTCAATATTCCAATTTTAGAGTGCATGTAATTCATTAAGAGGGTCTGAATGGGGGGGGGGGGGGGGGGGGGGGGGGTCTACATGTCAGTTGTCAGTTAAATTTTTGGCCATTTGTCAGTTATCAGTTAGCTCTAGTTAATCATTGCTAGAGAAAATTCACAATGTTTGACCACAAACACCAAATTTGTCAGTTGTCAGTTATTTTTCGGTTGTCAGTTGTCAGTAAAAAAGTCGTCATTTGTCAGTTGTCAGTTATGTTTAAGGCCGTTTGTCAGTAGTCAGTTAACCCCATTCAGACCCTCCATTAATCACAGACAGAACAACGACGTGTGATTCTGTTTCATAATGAAACATTTTTACTGAAATTTGTTTCTCCAAGAGAATTATATTTTTCATTGACATGAGTAAAACAGATCTTACCGTTTTCATGAAACATGAGTATGATTTTATTAATGGGACGATATTTGTGCTTTACATGATTCACCAAAAGGGATTGAAATTAAAATACAACTAAAATGTAATTTAATTTAGTTAAACGATTGTAAATCTGATACGAGTCTCTTCACAGCCGTTCGTGTTTCGGCTATAAACAATGTTATCATATCACTGTGTATAAACGTACGCACGTATTGCACATTGACGGTTATTTATCGTTCGTAGAAACTACACTTCTTAAAAAATAAAGTAGTTCATAGCTTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13401	AAA_22	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001315	Domain	CARD domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-