Detailed information of Acti_000979-T1 in Actinernus sp. WN-2022 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Acti_000979-T1SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-FScLC4GM_192732057027326012-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR016487FamilySm-like protein Lsm6/SmFInterproscan
IPR047575DomainSm domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11021SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-FInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005732Cellular Componentsno(s)RNA-containing ribonucleoprotein complexInterproscan
GO:0030490Biological Processmaturation of SSU-rRNAInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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