Gene detail

Detailed information of Acti_000825-T1 in Actinernus sp. WN-2022 Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Acti_000825-T1	UNCHARACTERIZED	ScLC4GM_19	23627220	23713071	+

Gene Structure

More details in Jbrowse Sequence

CDS

Acti_000825-T1

ATGAATAAGGGAATGGGACAACGATTAATGAAGAATCAGCCAGATTTTTTGAAGTATACCACACTAGAAGATTTTGGTTACAAGTTTAATGAAGATGGACAGCTCAGGCACAAAGAGACTGGAGAGAGGTTTCAGTTTGAAGTGAAAGAAGGGGACAGGAACTATAATCAGAAGTACTATGAGGCACTAGGAGAGGTTATTACAGATCATATCTATGAGTTGTTAACAACAACTGCAAATTTGAGGAAAATTCCCATTCCACTTGATGCTAAGGACCATGAAGCCCAAGGGTTTTTCTTTATGAGTGAGGATGCTTTAAATTCAAAGCAGCTCATGATCCTAATCCATGGCAGTGGTGTGGTTCGGGCTGGACAGTGGGCTAGAAGTCTGATCATCAATGACTGTCTGGAAAGTGGAACAATGTTACCTTACATTAGCAGAGCAAGGAAAGAAGGCTATGGCATTCTTGTAACAAATGGTAATCAGAATAATATTATGGAGCATGGGAAATATTTAACAATAAGGGGTAGCAAGTCCCCAGAAGCACACTTTGTTTATGTCTGGGAGCATGTCATCCGTAGAGCTGCTGCAAAGGACATCGTAATAGTAGCACACAGTTATGGAGGAGTAGTGGTTGTCAATGGAATGAGGGTGTGCAAAGATGCCATGGATCATGTTACAGCTGTTGCCTTCACAGACTCAGTACACAGTCTAGCACACCATGGGGCTGAAAGGAATCTCAGATCATGGTTCAAAAAGCACACCAGGAATTGGGTGTCGGCAAATGACCCTCTGGATACACCAATCTCATCCATGTATGGTGCAGCTGACTGTGATATGGTGTCAGCAGGAACATCACAGCGTGTCTGGACATCTCATTATGCCCGTGAATCAGTTTTCAAGTTCTTCAGTGAGAGGTTAAACCACAAGAAGGAGAATAAACAGCTAAAAAAAGACAAAACGAAAGTCAAGACAACTGAACAAGAACCAGAGCACCATACAGAAAAGGTAGTTCACATACAGGCTGAATCGAGCACAGAAATAGCTGATACAGAAAATAAAGATGACCCAACAGCAGAGAATCAAGGTACGAAGATGGAGCACATTGAAGCTACTGAACAAGAAAGCAAGGAAGTAACAACATCATCTGAAATAAAGGGTGAAGAAACCACTAAAGCAGTGCAAGAGTCAACAGTTACTAGTCCAGCTGGAGAAGTTAGTGAGAAAGTTGACGACGAGGAAGCTGATGCAGAACAATCAATGGATACCAGTGAGGAAAATGAGTCAAGCCTGGCTGAGGATTCCAAGGCAAAAAAGCACAGTCCCAAGAGGAAGCCGGATCTACACTGGCAGCATCTTAATCAGGATGACCTGTGTATCCCAGAGGAGGAGATTACGTTAAAGGATCAGATAGGCAGTGGTGCTTTCGGTACCGTGCATCGGGGGGAATGGAGGGGGACAGTTGTTGCTATAAAAAAGATTGATATCGAGCCAGAGACCAGAGAATATGTTACAAATTCAAGGGAACTTCGTATCTTAAGAACCTTGAGGCATCCAAACTTGCTTCTGTTGATGGGCTACTCGCTAACACGCGAAGGCAAACTGCTGCTTGTTTCACCTCTCGTCGATGGACAAAATCTCGAGGAAATTATATTTTCTCCAGAGCCAGTCATAAAGATCGAAAGTGACGCACAGAAAGTGCAAATCTTGCGCCAGATCGCCGTTGCGCTGAATTTTTTGCACAAGAAAAGGGTCATACATCAGGATCTGAAACCGGCAAATGTAGTGGTAGAGAAGGGTACCCTCAGGCCCGTTGTTGTCGATTTCGGCCTCAGTACGTTCTCGAGATCAGCCATGACGAAGTGTGGGGCAAATGCCGGTACTGTGGCATATCAACACATTGAGGCTTTAGAAGGACGCAGACCTACATCTGCAGTAGACGTCTATGCATATGGATGCATATTATACGAGGTTACAAGTGTTACAAGAGTATGGGCTGAGGTGCCTTCTGTTGTAGCTCTGATGGCTTTAATGTTGAATGGCAAATTTCCTAAAGTAGAACCAAATATCAATTTCTGTGGGTTGCTCAGCGTTGTAGAGGGGTGCTTTAGAAAAGCAGAAGAGCGATTGAGTATGGAAGAGATAATCCAGTTAATTGATTCAAAGGATCGAGTAAACTGA

Transcript

Acti_000825-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR048263	Family	Arb2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21357	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0031048	Biological Process	regulatory ncRNA-mediated heterochromatin formation	Interproscan
GO:0035197	Molecular Function	siRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-