Detailed information of scaffold82670_cov172_0.2 in Dracogyra subfusca Gene info
Gene IDAnnotationScaffoldStartEndStrand
scaffold82670_cov172_0.2IONOTROPIC GLUTAMATE RECEPTORscaffold82670_cov1722200032532-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF10562CaM_bdg_C0Calmodulin-binding domain C0 of NMDA receptor NR1 subunitDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR018882DomainCalmodulin-binding domain C0, NMDA receptor, NR1 subunitInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR049872DomainGlutamate [NMDA] receptor subunit 1-like, ligand-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004972Molecular FunctionNMDA glutamate receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017146Cellular ComponentNMDA selective glutamate receptor complexInterproscan
GO:0035235Biological Processionotropic glutamate receptor signaling pathwayInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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