| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| scaffold119835_cov77_0.32 | TRNA PSEUDOURIDINE SYNTHASE D | scaffold119835_cov77 | 7103 | 8161 | - |
| CDS | |||||
| scaffold119835_cov77_0.32 | |||||
| Transcript |
| scaffold119835_cov77_0.32 |
| Protein |
| scaffold119835_cov77_0.32 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01142 | TruD | tRNA pseudouridine synthase D (TruD) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001656 | Family | Pseudouridine synthase, TruD | Interproscan |
| IPR011760 | Domain | Pseudouridine synthase, TruD, insertion domain | Interproscan |
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR042214 | Homologous_superfamily | Pseudouridine synthase, TruD, catalytic domain | Interproscan |
| IPR043165 | Homologous_superfamily | Pseudouridine synthase, TruD, insertion domain superfamily | Interproscan |
| IPR050170 | Family | tRNA pseudouridine synthase D | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47811 | TRNA PSEUDOURIDINE SYNTHASE D | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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