| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_50661.1 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT | Sc3x4tf_91 | 8399942 | 8375708 | - |
| CDS | |||||
| pred2_50661.1 | |||||
| Transcript |
| pred2_50661.1 |
| Protein |
| pred2_50661.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR009145 | Family | U2 auxiliary factor small subunit | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12620 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0030628 | Molecular Function | pre-mRNA 3'-splice site binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0089701 | Cellular Component | U2AF complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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