Gene detail

Detailed information of pred2_49472.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_49472.1	INNER MEMBRANE TRANSPORTER YGJI-RELATED	Sc3x4tf_198	1434344	1466308	+

Gene Structure

More details in Jbrowse Sequence

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13520	AA_permease_2	Amino acid permease	Family	Interproscan
PF13906	AA_permease_C	C-terminus of AA_permease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002293	Family	Amino acid/polyamine transporter I	Interproscan
IPR029485	Domain	Cationic amino acid transporter, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000064	Molecular Function	L-ornithine transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006865	Biological Process	amino acid transport	Interproscan
GO:0015171	Molecular Function	amino acid transmembrane transporter activity	Interproscan
GO:0015181	Molecular Function	L-arginine transmembrane transporter activity	Interproscan
GO:0015189	Molecular Function	L-lysine transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0097638	Biological Process	L-arginine import across plasma membrane	Interproscan
GO:1903352	Biological Process	L-ornithine transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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