Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
pred2_49415.1 | CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR | Sc3x4tf_73 | 764538 | 846647 | + |
CDS | |||||
pred2_49415.1 | |||||
Transcript |
pred2_49415.1 |
Protein |
pred2_49415.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000504 | Domain | RNA recognition motif domain | Interproscan |
IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
IPR034769 | Domain | Cleavage and polyadenylation specificity factor subunit 6, RNA recognition motif | Interproscan |
IPR034772 | Family | CPSF6/7 family | Interproscan |
IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23204 | CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0003729 | Molecular Function | mRNA binding | Interproscan |
GO:0005847 | Cellular Component | mRNA cleavage and polyadenylation specificity factor complex | Interproscan |
GO:0098789 | Biological Process | obsolete pre-mRNA cleavage required for polyadenylation | Interproscan |
GO:0110104 | Biological Process | mRNA alternative polyadenylation | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |