| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_46553.1 | METHYL-CPG BINDING PROTEIN, MBD | Sc3x4tf_103 | 5648186 | 5665043 | + |
| CDS | |||||
| pred2_46553.1 | |||||
| Transcript |
| pred2_46553.1 |
| Protein |
| pred2_46553.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | MBD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01429 | MBD | Methyl-CpG binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001739 | Domain | Methyl-CpG DNA binding | Interproscan |
| IPR016177 | Homologous_superfamily | DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12396 | METHYL-CPG BINDING PROTEIN, MBD | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006346 | Biological Process | DNA methylation-dependent constitutive heterochromatin formation | Interproscan |
| GO:0008327 | Molecular Function | methyl-CpG binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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