| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_45533.1 | COPROPORPHYRINIGEN III OXIDASE | Sc3x4tf_181 | 7144883 | 7146286 | + |
| CDS | |||||
| pred2_45533.1 | |||||
| Transcript |
| pred2_45533.1 |
| Protein |
| pred2_45533.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04055 | Radical_SAM | Radical SAM superfamily | Domain | Interproscan |
| PF06969 | HemN_C | HemN C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004559 | Family | Heme chaperone HemW-like | Interproscan |
| IPR006638 | Domain | Elp3/MiaA/NifB-like, radical SAM core domain | Interproscan |
| IPR007197 | Domain | Radical SAM | Interproscan |
| IPR010723 | Domain | HemN, C-terminal | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR034505 | Family | Anaerobic coproporphyrinogen-III oxidase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13932 | COPROPORPHYRINIGEN III OXIDASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004109 | Molecular Function | coproporphyrinogen oxidase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0006779 | Biological Process | porphyrin-containing compound biosynthetic process | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0051539 | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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