Gene detail

Detailed information of pred2_43659.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_43659.1	ADULT RETINA PROTEIN	Sc3x4tf_178	150929	187241	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_43659.1

ATGGACCTCTATGGCAATACTCCACAGAGTGCAGATCACATGCTGCCCAATGATATATACCCAAATGATCCATTTCCAAATGCTTACAGCCCGAATTCTACCCATATGTATGAACAAGAGAGAGACTGGGCCCTCATATGCCAGATTGGTGGAAACCAAAGTCTTCAAATTGGCTGTAACAGGATCATAGCTGGCACTGAGGAATTTGATTTGAAACCACACTTTGAGAACAACACTGACAGTTTTGCATCAAACAATCTCTTTGACATGCCAGGATCCCCAGAACCCCAGTATAATGCAGACACAATGTGGGACAAGGATAAAGATTTTGATGAGATATTTCAGGGTAAAAAAACTGACCATGGGCCAACCCTGGCCCAGCTGAACTTTGGTGAGTTTCTGGTTGATGAGTTTACTGGTGATGAGATCTATTCATATAATAAGACCACAGGTAACAGCAGTGGTACCAGTGGCAGCAACGTTGTCACTGTCAGTGGAGCCAGCAGCAGTAATATAGGCACTGCTAACTCTGCTAACAGTACAGCCTCCAGTGTTGGTTCCAGTCTCAAAGATGTACGTGGTCAGTTCCTTGTTTCAAATGTAAGCTGCAAGCTATTGCAAACACCATCTGTACTTGCACAGAACTGGGAAGACAGTTCTACCAGTTCAACCCTGGGAGTTCCTGGGGTCAGTACTTGCTTCAATACAACTCCTACAAAGTCATCAAAAATGTTCCAACCCCTGAAACAAAGTTCAGTGGTGCCATCATGCACCGTGACTTGCGACACAGTGAGTGATACTAAGCCTAGCAACAAGTTCCATACAAGTGGTACCAGTTGCATTCCGATCAACAAACCTCTGAAAAATGAGGAGTTCTCACCAGTTGATTGCTGCCACAACTCGGCCGTTGGCAACATGGAACCTCATTCCTCTCCTGATGTGCCATTCAAGAACTCTTTGCAACAGCTTTTGTGTGAGAATACCACTGCACTGCAGACTACAATACATACCCTCACACAGAAAAAAACACAGCAACAAAAATCACCAACAGCCCCACAGCAGCCACAACAACATCATCATCACTCTCACCACCAACAACATTTGCAACAAACAGCAAAGGTTCAGCCCCAGATAGCAATTGTGTCACCACAGACACAGCTGCCCCGGACTCCAATGCAATCACCAACAACATCCAAAACTGTATCAGTTAATGATCACCAATGTTTAATGGTCACCAATGACGATACAAATGATGTGAAAACTACAGATGAAAAGTGGGAACAAATTATTCAGTTTATCCACAAGGAAGATTCTCCAAAGAGTGTCAAGAGAGAACGCATCAGCTCTACCAGCAGTTTTACCGCTTCAAATGATGACCATGACTCCAATGAAGGTGATCTCATGTCTGATGACTCCAGTGAATCTGGTGCTGATGAAGACTTCTTCTCTGATGCAGACTCTGCTCATAGTCAGAGTTCTCTAGGAAAGGAGGCACAAGCAGGCTCACCTAAGAAAAAAGAGCAGCAGTACTTTTGGCAGTACAATGTCCAAGCAAAAGGCCCAAAAGGTCAGAAGATGCAACTACTACCCATAGATCAGGACCCCCATGTTCTCAATACATTTGAGGATCCTGTGTTTGAGCTTGGTACCACATCCAAGCTGGGTTTACGGCACAGTGGCAAGGCTCGACGTGGAGATGGCAATGACATTGCCCCTAACCCAAAAAAACTTCATTTGATTGGACTACAACTGAAGAAGTTGACCCATGACATCAATGAGTTTCTACCAACAAGTGAATTGCCAGCCAATTTAAGAAATAGGACAAGAAAAGAGAAGAACAAACTGGCTTCAAGAGCTTGTCGTTTGAAGAAAAAAGCCCAGCATGAAGCTAACAAAGTAAAATTGTATGGACTAGAACAAGAACACCGCCGATTGATGAACATTATAGAAACTGTGAAACTGAGGATGTTGACAACTGTTCAGTCTGGTAAATGTATAAAGTCTGAGGATGGCCAAATTTGCTATGGCACAGGAAATAAACAGTCCAAATTTGTGGAAGAAGTCATCGAGTTGCATAAGCCCTCTGTGATTGCTGGTCGTACTGCTGAATATGTGAATGAAGTTCTTGTCAAAGTAACGGGGGGTGACCACTCTGGTGGACTTCCCCTCCCAAAGAGAAAATCAAGCTCTGCAACATCCGTTCCAAGCTCTGATGAGGAATTCAGAAGTGCATTATCCCTAAAAAGTGACTTTGGCATCATATTTGGGAGACTTGACAATCCGAAGCAAGAAAGTGATCAAAACGTAGAACAATTCAGGCTGTGT

Transcript

pred2_43659.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR039165	Family	CREB3 regulatory factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21552	ADULT RETINA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006986	Biological Process	response to unfolded protein	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-