| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_33866.1 | RNA DEMETHYLASE ALKBH5 | Sc3x4tf_531 | 136660 | 165730 | + |
| CDS | |||||
| pred2_33866.1 | |||||
| Transcript |
| pred2_33866.1 |
| Protein |
| pred2_33866.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13532 | 2OG-FeII_Oxy_2 | 2OG-Fe(II) oxygenase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027450 | Domain | Alpha-ketoglutarate-dependent dioxygenase AlkB-like | Interproscan |
| IPR032860 | Family | RNA demethylase ALKBH5 | Interproscan |
| IPR037151 | Homologous_superfamily | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32074 | RNA DEMETHYLASE ALKBH5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006397 | Biological Process | mRNA processing | Interproscan |
| GO:0006406 | Biological Process | mRNA export from nucleus | Interproscan |
| GO:0035515 | Molecular Function | oxidative RNA demethylase activity | Interproscan |
| GO:0035553 | Biological Process | obsolete oxidative single-stranded RNA demethylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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