Gene detail

Detailed information of pred2_32585.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_32585.1	ARYL HYDROCARBON RECEPTOR	Sc3x4tf_768	1462392	1377225	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_32585.1

ATGTATTTCTCTGGCATCAAATATATATGTATTTCTCTGTCATCAAATATATATTTCTCTGTCATCAAATATATATTTCTCTGTCATCAAATATATATATATTTCTCTGTCATCAAATATATATATATTTCTCTGGCATCAAATATATATGTATTTCTCTGTCATCAAATATGTATTTCTCTGTCATCAAATATATATGAACATGAAAAACTGGCAGATACGCATGACTGCTTCTTCTTTCTAATCTGTGCAGGTGGCTTCCGCTTGTGCGGTTGTGCTGTCCAACTCAATGACTGCATTCAGCAGATTACATTAAGGTCTTTATCTTTACTCACAGCTGCTCAAATGGAAAACCTCATTGGATCAGTTTCGGGAAAGGAGCAAGAAGTAATGCAGATAAAAAAACTCACAAAAACAAATCTAACCCTCAAACTTAATTCTATCAGAATTGTCATTGCATTGGAAACTGTGTTACCTGATCGATATTCAATTGAAAGTCATCTTCTGAATCGATCTCATCTATTTCCAGAACCTGGTTTTTCTGAAGGAGACAGTATCTTACAGGCTCTCTATGGCTTTTTATTTGTGGTAACTTGTGAAGGAGAAGTTTTCTTTGCTTCACGTACAGTGGAACAATACCTTGGCTTCCATCAGTCTGACATTATACATCAAAGTGTGATGGAACTGATCCATTCTGAAGATCGAGAAGAATTTAAAAGGCAGCTGCTATGGAACTCCAGTCTTCCTCCCGATAAAGCAAATCTTACATTGCATGAAATCATGCTACCTGAAAACAACCACTATCTGCACAGGTCTTTCACTGTAAGGTTTCGCTGCTTGCTAGACAACACCTCAGGCTTCATTACATTAGAAATCAGTGGCTGGATTCGTATTCTTCATGGGCAAGCTCTCAAATCAGAGGAACCTATGATGGCACTGTTTGCAACCTGTTGTCCGTTTGGTCCCCTTTCCTTGTTTGACATTCCTTCAAGAGATCTCACATTCAAATCAAAGCACAAAATGGACCTTTCCCCATTGTCCATGGATAGCAGGGGGAAAATGATGTTTGGTTATTCTGATAGAGAACTTGTCACTAAATCTGGCTATGATTTAGTACATCCTGATGATCTTTCATACTTTGCTGCTGCCCACCAGGAATGTAAGTATTTGACCGTTATGATCAAGACTGGCAGCTCTGGTCTAATAGCTTATCGGTGGATCATGAAGGATTTGCGCTGGCTGTGGTTGCAGTCCAGTTGCAAAGTGGTTTATAAAAACAGCAAACCAGACTTTGTCATCTGCACTCACAGACAACTCACGGATGATGAGGGCCAAGATCTGTTTGGTAAACGTGGAAATGAGTTCAAGCTGCCATACCCATTGCTGGATCTGGACATTTGTTCTGGATCTGGTTTTCCTGAAGATGATTTTGTCACAAAGTCCAAAACAACTAAAAACAAGAAACAGAAATCTCAAGTACGGGACTATTTGCAAGCAAGCCGTAAGCGGAAGGCAACGACCTACCGGGATGCCTTCCCAGCACTGAATGGTTATGCTTCCTTTTCTGGCCTCAATGGCTACGGCCCGTGTGACGGTGCCGAGTTGAAGCCAGATCTCTTCTACTCTTACACTGGTAACAATTTTGCCTTAGATTCGGACATTTACCGATCTCACGGCTATACACCGTTGCCTGGCTCTGTTTATTCCCAAACAGATCCATTCTCAGAAAAACACTGTTACTCAAACGGTTACTATTTCGACCATAGGCAATATCAACATCCACTGTCCTATCACAGTAACAGTTATGCCGATCTGGTTGCCCAGTCGAAATATGGCTATGATATACCAAAGTATGGTTTTGATGGTTACAGTATAGATCTCAGTAAAAAAGTCCATTTTGGGGATGAATATTCTCGCTATGATAACGACTATCGTAAATATGGTTATGAATATAGCAATGATAGACTCACTACTAGAATCAATGGAAACTATGATCCGATGGAGTTTCGTTCTTCTGCTGCTGTGTTTAATGGTTCACCACTGGTTGGCTGTGCAGAGACATCGATTGCACCTGGAGCTGTATCCTCACCGGCCTGCCTACCTTCTACCTCTATATATAAAACTTCTATAAATGACAGTGGGCAACAGCAGCAGCAGCAACAACAGCAACAGCAACAACAACAGCAGCAGCAGCAGCAACAGCAGCAACAACAACAGCAACAACAACAGACAGTCACTACTAAAACCTCAGTCATTGACACAAAAGTGAAAAACTCTTCTAATTCTATAGACAGTCACACTATTCTTCCTCACAATACAGTCATCAAAAATATTGGCCATGCATCTTCACATTTAAGCAATTCACATTCAGATCACAACTCAGAGCCTCACAATAGCAGTGGCTCAAATCTTTATAAGCGGACAAATGTAATCACCAGTGGTTCATCTGCATTACCATGGACGTCATGTGTCAAATCTGCTCAAGCCCTCAAACAGAATCTGGTCTCCAATTCTCAGTTGGAGCACCGATCAGAGGCATCCACCCAGCAGCACAAATCAGTGATATCTGACGTGAACACAAATGATAAAGTATCCTCTGGGCTCATGGCAGGCAGCCTGTCCACATCAAGTCCAATTGCATGCTCAACTCCAGCTTCAGTCATTCAGCTGTCAGAAAAAGCTAGCCACAACAGATCATGTGAGAAGCAGCAACCTGTAATGAGCAGCATCCCAGTCCCTGTAGTGAAGTCCTCTACATCATCACCATGGTTACACCAGTATGTTGGTAGACACAGTGCAGTGGGTTATGGTTGTCTAAAGGACTGGGCTTCATCAGTTAATGCTGCCAGCAATACTTATCCTTGCCATCAAAAGGTCCAACAAGGATTAATCCCAGGTGACACCTATTCTCAAGCAGCCAAATATCTATTAAAGGAAGAAGCCATTGGACGAGAGAGGAGAAATAATTTAGCTCCACAG

Transcript

pred2_32585.1

atgtatttctctggcatcaaatatatatgtatttctctgtcatcaaatatatatttctctgtcatcaaatatatatttctctgtcatcaaatatatatatatttctctgtcatcaaatatatatatatttCTCTGGCATCAAATATATATGTATTTCTCTGTCATCAAATATGTATTTCTCTGTCATCAAATATATATGAACATGAAAAACTGGCAGATACGCATGACTGCTTCTTCTTTCTAATCTGTGCAGGTGGCTTCCGCTTGTGCGGTTGTGCTGTCCAACTCAATGACTGCATTCAGCAGATTACATTAAGGTCTTTATCTTTACTCACAGCTGCTCAAATGGAAAACCTCATTGGATCAGTTTCGGGAAAGGAGCAAGAAGTAATGCAGATAAAAAAACTCACAAAAACAAATCTAACCCTCAAACTTAATTCTATCAGAATTGTCATTGCATTGGAAACTGTGTTACCTGATCGATATTCAATTGAAAGTCATCTTCTGAATCGATCTCATCTATTTCCAGAACCTGGTTTTTCTGAAGGAGACAGTATCTTACAGGCTCTCTATGGCTTTTTATTTGTGGTAACTTGTGAAGGAGAAGTTTTCTTTGCTTCACGTACAGTGGAACAATACCTTGGCTTCCATCAGTCTGACATTATACATCAAAGTGTGATGGAACTGATCCATTCTGAAGATCGAGAAGAATTTAAAAGGCAGCTGCTATGGAACTCCAGTCTTCCTCCCGATAAAGCAAATCTTACATTGCATGAAATCATGCTACCTGAAAACAACCACTATCTGCACAGGTCTTTCACTGTAAGGTTTCGCTGCTTGCTAGACAACACCTCAGGCTTCATTACATTAGAAATCAGTGGCTGGATTCGTATTCTTCATGGGCAAGCTCTCAAATCAGAGGAACCTATGATGGCACTGTTTGCAACCTGTTGTCCGTTTGGTCCCCTTTCCTTGTTTGACATTCCTTCAAGAGATCTCACATTCAAATCAAAGCACAAAATGGACCTTTCCCCATTGTCCATGGATAGCAGGGGGAAAATGATGTTTGGTTATTCTGATAGAGAACTTGTCACTAAATCTGGCTATGATTTAGTACATCCTGATGATCTTTCATACTTTGCTGCTGCCCACCAGGAATGTAAGTATTTGACCGTTATGATCAAGACTGGCAGCTCTGGTCTAATAGCTTATCGGTGGATCATGAAGGATTTGCGCTGGCTGTGGTTGCAGTCCAGTTGCAAAGTGGTTTATAAAAACAGCAAACCAGACTTTGTCATCTGCACTCACAGACAACTCACGGATGATGAGGGCCAAGATCTGTTTGGTAAACGTGGAAATGAGTTCAAGCTGCCATACCCATTGCTGGATCTGGACATTTGTTCTGGATCTGGTTTTCCTGAAGATGATTTTGTCACAAAGTCCAAAACAACTAAAAACAAGAAACAGAAATCTCAAGTACGGGACTATTTGCAAGCAAGCCGTAAGCGGAAGGCAACGACCTACCGGGATGCCTTCCCAGCACTGAATGGTTATGCTTCCTTTTCTGGCCTCAATGGCTACGGCCCGTGTGACGGTGCCGAGTTGAAGCCAGATCTCTTCTACTCTTACACTGGTAACAATTTTGCCTTAGATTCGGACATTTACCGATCTCACGGCTATACACCGTTGCCTGGCTCTGTTTATTCCCAAACAGATCCATTCTCAGAAAAACACTGTTACTCAAACGGTTACTATTTCGACCATAGGCAATATCAACATCCACTGTCCTATCACAGTAACAGTTATGCCGATCTGGTTGCCCAGTCGAAATATGGCTATGATATACCAAAGTATGGTTTTGATGGTTACAGTATAGATCTCAGTAAAAAAGTCCATTTTGGGGATGAATATTCTCGCTATGATAACGACTATCGTAAATATGGTTATGAATATAGCAATGATAGACTCACTACTAGAATCAATGGAAACTATGATCCGATGGAGTTTCGTTCTTCTGCTGCTGTGTTTAATGGTTCACCACTGGTTGGCTGTGCAGAGACATCGATTGCACCTGGAGCTGTATCCTCACCGGCCTGCCTACCTTCTACCTCTATATATAAAACTTCTATAAATGACAGTGGGCAACAGCAGCAGCAGCAacaacagcaaCAGCAACAACAACAGCAGCAGCAGCAGCAACAGCAGCAACAACAACAGCAACAACAACAGACAGTCACTACTAAAACCTCAGTCATTGACACAAAAGTGAAAAACTCTTCTAATTCTATAGACAGTCACACTATTCTTCCTCACAATACAGTCATCAAAAATATTGGCCATGCATCTTCACATTTAAGCAATTCACATTCAGATCACAACTCAGAGCCTCACAATAGCAGTGGCTCAAATCTTTATAAGCGGACAAATGTAATCACCAGTGGTTCATCTGCATTACCATGGACGTCATGTGTCAAATCTGCTCAAGCCCTCAAACAGAATCTGGTCTCCAATTCTCAGTTGGAGCACCGATCAGAGGCATCCACCCAGCAGCACAAATCAGTGATATCTGACGTGAACACAAATGATAAAGTATCCTCTGGGCTCATGGCAGGCAGCCTGTCCACATCAAGTCCAATTGCATGCTCAACTCCAGCTTCAGTCATTCAGCTGTCAGAAAAAGCTAGCCACAACAGATCATGTGAGAAGCAGCAACCTGTAATGAGCAGCATCCCAGTCCCTGTAGTGAAGTCCTCTACATCATCACCATGGTTACACCAGTATGTTGGTAGACACAGTGCAGTGGGTTATGGTTGTCTAAAGGACTGGGCTTCATCAGTTAATGCTGCCAGCAATACTTATCCTTGCCATCAAAAGGTCCAACAAGGATTAATCCCAGGTGACACCTATTCTCAAGCAGCCAAATATCTATTAAAGGAAGAAGCCATTGGACGAGAGAGGAGAAATAATTTAGCTCCACAGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00989	PAS	PAS fold	Domain	Interproscan
PF08447	PAS_3	PAS fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000014	Domain	PAS domain	Interproscan
IPR013655	Domain	PAS fold-3	Interproscan
IPR013767	Domain	PAS fold	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR039091	Family	Aryl hydrocarbon receptor/Aryl hydrocarbon receptor repressor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10649	ARYL HYDROCARBON RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0004879	Molecular Function	nuclear receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006805	Biological Process	xenobiotic metabolic process	Interproscan
GO:0009410	Biological Process	response to xenobiotic stimulus	Interproscan
GO:0034751	Cellular Component	aryl hydrocarbon receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-