Detailed information of pred2_31052.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_31052.1SAP30Sc3x4tf_115616847981645493-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF03962Mnd1Mnd1 HTH domainDomainInterproscan
PF13866zf-SAP30SAP30 zinc-fingerDomainInterproscan
PF13867SAP30_Sin3_bdgSin3 binding region of histone deacetylase complex subunit SAP30FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR024145FamilyHistone deacetylase complex subunit SAP30/SAP30-likeInterproscan
IPR025717DomainHistone deacetylase complex subunit SAP30 zinc-fingerInterproscan
IPR025718DomainHistone deacetylase complex subunit SAP30, Sin3 binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR038291Homologous_superfamilySAP30, C-terminal domain superfamilyInterproscan
IPR040453DomainMnd1, HTH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13286SAP30Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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