Gene detail

Detailed information of pred2_31046.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_31046.1	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	Sc3x4tf_1156	1429704	1532010	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_31046.1

ATGTCCAAACCGCTTTTTCCTTCTCTTGTACCAAAAGCCGTCGATTCTTTTTGGTTTCCAGTTGATAAACCATGTCTGGACGAGTCCGAAATTAGTGCCCTTGAGGCAGACTATAATAACTGGGCTCAGAGTGTGGGAGATAAAGACAATGCAATTGTTCCAATCGGAAAAACAGCACAAGAGCATTATGATGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGTTGATGATGAGAGTGATACTAATGATGATGAACTAGACACAGACATGGTAGATGACCGGGACTCAACAGATGATGAGAGACAGATTTTCTTATTTTCCAGCAAGATGAGGAATCGTAGTAACTCTGGAGTTCGATTAGATTATTACACAAGACTTGTAAACAAAACAATTATTGCCCATCAGAATGCTGTGACAGGACTTTTGACCACCACTCACACGTCTCATGCTTGGGTACGAGACAATGTCTATTGCATCACAGCCGTGTGGGGTCTGGCTTTGGCCTACCGTAAAGCGGCTGATCTTGATGAAGACCGATCAAAGGCATTTGAACTGGAACAGTCTGTGGTGAAGTGTATGCGAGGTCTGTTACAAGCGATGACACTTCAATGCCACAAACTTGAGAAATTCAAAAAGACGCAGAACCCAGCCGATGCCCTTCATGCCAAGTACAACAGCGTGAATTGCAAAACTGTTGTTGGTGATTTGGAATGGGGTCACCTCCAATTAGATGCCACTTCCCTCTACCTCCTCATGTTAGCTCAAATGACTGCATCCGGTTTGAAGCTCATCTATTCTCTGGATGAAGTGGCATTTATACAAAACTTGGTTTTTTATATCCAAGCTGCGTATCGCATTCCTGATTATGGTATTTGGGAGCGTGGTGATAAGACTAATCATGGCCTGCCAGAACTTAACTCTAGCTCTATTGGTATGGCCAAGGCTGCATTGGAAGCCATTGATGGTCTTGATTTATTTGGATCAAGAGGTGGAACCAGTTCAGTCATCCACGTCCTCCCTGATGAGGCTCAGCAGTGTCAGGAAATCGATGCTGGTCTGATGACAGTGATCAGTTTCCCAGCTTTTGCCTGTGACAAACCAGAGTTGATTGCTGAGACAAAAACCCAAATTCTAGACAAGTTGGAAGGAGTATATGGCTGTAGCCGCTTCCTCAGAGACGGATACAAGACTCCTAGGGAGGACCCCAACAGGTTGCATTATGAACCCGGTGAATTAATGATGTTTGAGAATATTGAATGTGAATGGCCTCTATTTTTTGCATTCTTCATTCTTGATGGTCTCTTCACAAACAACATGGAGCAGACTGAGAAGTATCGAGCCTTGTTGGATGGCCTTTTGCATAAGAATGAAGAAGGAATTCCTTTGGTTCCAGAATTATTTCAAGTACCTAAGGACAAGAAACGTTCAGCAATTGGTCGAATGCCTCATCTGTGGGCCCAATCACTCTTCATCCTGGGAAAACTCATTTATGAAGGTTTTCTCTCTCCCGGTGAACTGGATCCTTTAAATAGACGTTTGGTAGCAACTCCCAGACCTGATGTTGTTGTCCAAGTTGTGATTTTGGCTGAGGATGACTACATTCAAGATCGTCTCTCAGATTTTGGAATTGAAGTTCAAACAACAGCAGAAGTTGAACCAATCAAGGTTTATCCTGCACGAATCCTGAGCCATATCTATTCACTTCTTGGAAAGAATAAACGTCTTGGGCTGACTGGCCGTCCCTCCTCTGAGATTGGACTCTTGGCCACCAGCAAATTGTATACGTTGGGTGAGAAGATTCTGGCTTTTGCTCCTCAGTTTCTGGATAATTTGCACTTTTATCTGCCATCAGACAACGGCTTCATCATGGATCATTTTAAGTCTGATGTTGAAACGCTGAGTCATCACTGGAGGATGCTGGGACGCCCCATTATTATCTTCCCTGTCAGCAGATCAATGTTAGGTGCGATTGGAAATGGTTACTGTAGCATTTCCAGGTTTATGGACCGTCACCATTTCTACGCTGTGCTTGACCCTCAGTTTTATGTTGCTTTCTTCCGATCGGAAATAAACTATTTAAAAAATAACTGGGCAGCCATTAAAGGACGACCGACAATGACCTTGGTCATCCAGCGATGGTTACTAGATCATGGCAAAATTCCATCCACTGCTCTTGTCGCCAATATAAAAAAATTACAAAGTGGTTATATCAATGGAACAAGAGTCCAGGTTGGTTGTATGAAGGATTTTCTCAGTACCAGTTGCAGCAGTAACCTTAGTTTTGTTTTTGATTCGGAAGGAGAAGATCAAGTCTCCCGTATTGATGGTTTATTTCTGATACCAATGGCATGGGAATGTCTTGAACAAATAAACAAAAAGTTTCCATTAAACAACAATGCGAAGAAGAAAAAAGACTTGAAAGATTATACAGAAATCTTTAAAACATATTGTGCGTGTATGTGTCATTTCAGAAAACATGGTGCATGTATGTGTCATTTCAGAAAACATATGGTGCATGTATGTCATTTCAAAAAACATATTGTCCATATATATGTCATTTCAGAAATCATATTCTCCATATATATGTCATTTCAGAAATCATATTGTCCATATATGTGTCATTTCAGAAAACATTGTGCATGTATGTGTCATTTCAGAAAACATATTTTGCATGTAGATGTCATTTCAGAACACCTTATGTGCATATAAAACAAACTGATGAAGAGCATCAAAAACAAATTGGATGCCGTATATGTTCAAGGCAATGTTCTTGGCTCATCAAGGGAATGGGGACGTAAGAAAAGTGCTGTTCCTGGAAAACTGTCTCGCAGAACCTCTGTACATGGCATCATCAGAAGATCACGCAGCATTCAGATAGACTCTGATACCCCAGCAGTAATGTCATTGTGCATTTGTTATGCCAACTTGGATTCTTCTGTCTTTTTAAATGATGACTTCACAGATGGAAACAGTAGTAAGTCCAGCAGCCCCGGTTCTCCCAAAACCCCAAATGAATTTCAGGTTCCTCAGCACTTGAAGCTGGGAGTGGATCCTGCTTTTCTAGCCCAAACTGCCCAGGGATCCCCTAAGTTGGGTAGAAAAGTAAAAGGATCTGCTGAAGAAGCAAGCAAACATTTGATCGAGTTGTTTGGCACGATTGATATCAATGAACTTCTTGAAAATCTGAAACAATCGGAGAGTATGCACGAACAGGCTGATATCATCCATTACCTTTATATTGCAAAG

Transcript

pred2_31046.1

ATGTCCAAACCGCTTTTTCCTTCTCTTGTACCAAAAGCCGTCGATTCTTTTTGGTTTCCAGTTGATAAACCATGTCTGGACGAGTCCGAAATTAGTGCCCTTGAGGCAGACTATAATAACTGGGCTCAGAGTGTGGGAGATAAAGACAATGCAATTGTTCCAATCGGAAAAACAGCACAAGAGCATTATGATGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGTTGATGATGAGAGTGATACTAATGATGATGAACTAGACACAGACATGGTAGATGACCGGGACTCAACAGATGATGAGAGACAGATTTTCTTATTTTCCAGCAAGATGAGGAATCGTAGTAACTCTGGAGTTCGATTAGATTATTACACAAGACTTGTAAACAAAACAATTATTGCCCATCAGAATGCTGTGACAGGACTTTTGACCACCACTCACACGTCTCATGCTTGGGTACGAGACAATGTCTATTGCATCACAGCCGTGTGGGGTCTGGCTTTGGCCTACCGTAAAGCGGCTGATCTTGATGAAGACCGATCAAAGGCATTTGAACTGGAACAGTCTGTGGTGAAGTGTATGCGAGGTCTGTTACAAGCGATGACACTTCAATGCCACAAACTTGAGAAATTCAAAAAGACGCAGAACCCAGCCGATGCCCTTCATGCCAAGTACAACAGCGTGAATTGCAAAACTGTTGTTGGTGATTTGGAATGGGGTCACCTCCAATTAGATGCCACTTCCCTCTACCTCCTCATGTTAGCTCAAATGACTGCATCCGGTTTGAAGCTCATCTATTCTCTGGATGAAGTGGCATTTATACAAAACTTGGTTTTTTATATCCAAGCTGCGTATCGCATTCCTGATTATGGTATTTGGGAGCGTGGTGATAAGACTAATCATGGCCTGCCAGAACTTAACTCTAGCTCTATTGGTATGGCCAAGGCTGCATTGGAAGCCATTGATGGTCTTGATTTATTTGGATCAAGAGGTGGAACCAGTTCAGTCATCCACGTCCTCCCTGATGAGGCTCAGCAGTGTCAGGAAATCGATGCTGGTCTGATGACAGTGATCAGTTTCCCAGCTTTTGCCTGTGACAAACCAGAGTTGATTGCTGAGACAAAAACCCAAATTCTAGACAAGTTGGAAGGAGTATATGGCTGTAGCCGCTTCCTCAGAGACGGATACAAGACTCCTAGGGAGGACCCCAACAGGTTGCATTATGAACCCGGTGAATTAATGATGTTTGAGAATATTGAATGTGAATGGCCTCTATTTTTTGCATTCTTCATTCTTGATGGTCTCTTCACAAACAACATGGAGCAGACTGAGAAGTATCGAGCCTTGTTGGATGGCCTTTTGCATAAGAATGAAGAAGGAATTCCTTTGGTTCCAGAATTATTTCAAGTACCTAAGGACAAGAAACGTTCAGCAATTGGTCGAATGCCTCATCTGTGGGCCCAATCACTCTTCATCCTGGGAAAACTCATTTATGAAGGTTTTCTCTCTCCCGGTGAACTGGATCCTTTAAATAGACGTTTGGTAGCAACTCCCAGACCTGATGTTGTTGTCCAAGTTGTGATTTTGGCTGAGGATGACTACATTCAAGATCGTCTCTCAGATTTTGGAATTGAAGTTCAAACAACAGCAGAAGTTGAACCAATCAAGGTTTATCCTGCACGAATCCTGAGCCATATCTATTCACTTCTTGGAAAGAATAAACGTCTTGGGCTGACTGGCCGTCCCTCCTCTGAGATTGGACTCTTGGCCACCAGCAAATTGTATACGTTGGGTGAGAAGATTCTGGCTTTTGCTCCTCAGTTTCTGGATAATTTGCACTTTTATCTGCCATCAGACAACGGCTTCATCATGGATCATTTTAAGTCTGATGTTGAAACGCTGAGTCATCACTGGAGGATGCTGGGACGCCCCATTATTATCTTCCCTGTCAGCAGATCAATGTTAGGTGCGATTGGAAATGGTTACTGTAGCATTTCCAGGTTTATGGACCGTCACCATTTCTACGCTGTGCTTGACCCTCAGTTTTATGTTGCTTTCTTCCGATCGGAAATAAACTATTTAAAAAATAACTGGGCAGCCATTAAAGGACGACCGACAATGACCTTGGTCATCCAGCGATGGTTACTAGATCATGGCAAAATTCCATCCACTGCTCTTGTCGCCAATATAAAAAAATTACAAAGTGGTTATATCAATGGAACAAGAGTCCAGGTTGGTTGTATGAAGGATTTTCTCAGTACCAGTTGCAGCAGTAACCTTAGTTTTGTTTTTGATTCGGAAGGAGAAGATCAAGTCTCCCGTATTGATGGTTTATTTCTGATACcaatggcatgggaatgtcttgaacaaataaacaaaaagtttccattaaacaacaaTGCGAAGAAGAAAAAAGACTTGAAAGATTATACAGAAATCTTTaaaACATATTGTGCGTGTATGTGTCATTTCAGAAAACATGGTGCATGTATGTGTCatttcagaaaaCATATGGTGCATGTATGTCATTTCAAAAAACATATTGTCCATATATATGTCATTTCAGAAATCATATTCTCCATATATATGTCATTTCAGAAATCATATTGTCCATATATGTGTCATTTCAGAAAACATTGTGCATGTATGTGTCATTTCAGAAAACATATTTTGCATGTAGATGTCATTTCAGAACACCTTATGTGCATATAAAACAAACTGATGAAGAGCATCAAAAACAAATTGGATGCCGTATATGTTCAAGGCAATGTTCTTGGCTCATCAAGGGAATGGGGACGTAAGAAAAGTGCTGTTCCTGGAAAACTGTCTCGCAGAACCTCTGTACATGGCATCATCAGAAGATCACGCAGCATTCAGATAGACTCTGATACCCCAGCAGTAATGTCATTGTGCATTTGTTATGCCAACTTGGATTCTTCTGTCTTTTTAAATGATGACTTCACAGATGGAAACAGTAGTAAGTCCAGCAGCCCCGGTTCTCCCAAAACCCCAAATGaatttcaggttcctcagcacttgaagctgggagtggatcctgcttttctagcccaaactgcccagggatcccctaagttgggtagaaaagtaaaaggatctgctgaagaagcaagcaaacatttgatcgagttgtttggcacgattgatatcaatgaacttcttgaaaatctgaaacaatcggagagtatgcacgaacaggctgatatcatccattacctttatattgcaaagtaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00723	Glyco_hydro_15	Glycosyl hydrolases family 15	Repeat	Interproscan
PF15243	ANAPC15	Anaphase-promoting complex subunit 15	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008734	Family	Phosphorylase kinase alpha/beta subunit	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR011613	Domain	GH15-like domain	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR026182	Family	Anaphase-promoting complex subunit 15	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10749	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0005964	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005977	Biological Process	glycogen metabolic process	Interproscan
GO:0090266	Biological Process	regulation of mitotic cell cycle spindle assembly checkpoint	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-