Detailed information of pred2_21022.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_21022.1SERINE/THREONINE-PROTEIN KINASE ATMSc3x4tf_4156300405717630+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan
PF02259FATFAT domainRepeatInterproscan
PF02260FATCFATC domainFamilyInterproscan
PF11640TANTelomere-length maintenance and DNA damage repairDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR003151DomainPIK-related kinase, FATInterproscan
IPR003152DomainFATC domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR021668DomainTelomere-length maintenance and DNA damage repairInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR038980FamilySerine/threonine-protein kinase ATM, plantInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR044107DomainATM, catalytic domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR37079SERINE/THREONINE-PROTEIN KINASE ATMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016301Molecular Functionkinase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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