Gene detail

Detailed information of pred2_20782.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_20782.1	SOLUTE CARRIER FAMILY 35	Sc3x4tf_651	2091522	2139261	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_20782.1

ATGAAGTCTTTACACGTGTACGACAATAAAGACAAACTGATGGAGTCGCTTTTTTATAGATCGTTAAAAATCGCCGCTGTAGTGGCAAATTACTGGTTTGTTTCCATATCTATGGTATTTGTGAACAAATATTTACTAAGTAGCAAGCAACTAAAGACACTACCCCTGTCAATAATATTTGTTGGGATGATCTCATTCAACAACCTCTGTCTAAAATATGTGGACGTTCCTTTCTACTATATCAGCCGATCTTTAACAACTGTCTTCAATGTTGTCTTCTCTTACATTGTCCTCAAGCAGAAAACATCCATCCCTGCCATTGGATGTTGTGCAGTGATCATTGCTGGCTTTACCTTGGGCGTTGACCAAGAAGGAGTTTCTGGCTCCTTAAGTGTTACTGGTGTGATATTTGGGGTCTTCGCTAGTGCAAGTGTAGCCATGAATGCTATCTTCACAAAAAAGATCCTACCAATGGTAGACAACAATGTCTGGCGCCTCACTTTATACAACAACATTAATGCCACCATCCTCTTCATTCCACTGATGCTTATCTTTGGTGAATTCAACACTGTTATCTCGTTCCCTTACATTGGGCATATGCACTTTTGGTACATCATGTCTGCCAGCGGATTACTTGGCTTTGCCATTGGTTACGCCACAGGTCTCCAGATCCAGTACACATCTCCACTGACACACAATGTGTCAGGCACAGCTAAGGCCTGTGCCCAGACAGTCATCGCCTGCATTTACAGTGGGGATGTGAAATCCTTTCTATGGTGGTGCAGCAACTTGACCGTTCTCTTTGGATCCTTGGGTTATACAGAGGTGAAGCGTCGAGAGATGAAGAAAGAGCATTCGATAGAGATGCAACATGCAAAAAACGAAAAGGACATTGAGAGACAGACAGAGAAACTATTACCAGCAAAGCTCCTTGGCAAACCCAATAATGGTGGTGTGCATACTTCGGATCTGGTCCACAAACAGTTCCATATGCAGACATCTCCTCCACTTGGCCATCGGAGACATGATCCGGATTTTTTTCTGTCTACCGATCCACATCGCCACTTATTTTGGAAGGTATTTCTGAATATTTTTACTGAACTTCTCCAACTTCTTATTCTTTTGCTGATCAGCAGTGATCGCTACTATGCAGTTGCGAAGCCATTTAAAAATTGCAGCAAGCAGAAAATGAAATCGTTTTTTATGCTGATTTGTTCATGGTGTCTTGCTATCTTTGGAGCCAGCAGCGCTTCGTATTTCTATGAAGACTATAGGAAAAAAATGCAGACTTTGAGACAAAAAAAAGTTTCCCCTTATACCACTCATTCAGAAGTTAAAGAAAAAAGTGATATGACCCCCAAGAAGATTCTACCAGAGTCGATAAAGGAAATGACAAATAATGTTGTCCATGCTCAAGTCGTGGATGATGCAGTCACTGACATAAAATATCCAGAAACAAAAACTCCCCAGAATGAAAGACAAACAGAAATTAAAGTTGACACAGATCTTTCAAAAGATCTGTCAGATTCAGCAAATATTCTTCCGACTTCACTAGTTTTGATGCCATTGAATCTCGCCACAGATGTCAATGAAAGTGCAATGAATTGGAAACCCCAAGAAGAAAAATCAGAAACCATTGTCACGGATTTGAAATGTAGAAAGAAAGAATATCCACAAATGGATATCACTGCTGACGCAACTGAAGTTCTAGAAAATTCTGAGGAGGGTGACGGAACTCAGAGGCTGGATATTGTCATCAATTCTACGCTCAATGCTATTGCTACAAAAACTGAAATTGTTGATGGTCAAAACACTTCAGTCATAAACCCTAACAAAGAGCAGTCATCTTTTTGCCGGGCCAACAAAATTGACAAAATGAAAGTAAAACCTGCTGTTAATTTTGAAGCTGGTATTGTTAATAAAAGTGTGCAAAATGTAACACCCTGGGAGATATCCAAGTTTTCTTCTGGGAATGATCGGGACTCTACACAAGGTACAATCGGTACTGAAAAACTATTTGTCATTTCACAGCAAGTTACAACTCTTTCTGATGTAAATAGACCAAGCTCTTGTTCTGTCTTTAAAGACAAAACCGAATCAGGTCTCCAGCTGGAAAAGGGATTTGTAATCCCAACAGATGACAACAAAGAAGAAATCAAATCTGATAATCTACCAAATATTGGAAATAAGGCCCCAGCACAAACAAAAGTCCATGAACAAAGCAAGAAAGTCACATCGACAGGAAAAGAAGAAAAAAGAAACGGGAACACTGGTGTGAAGTTTTACGACAATAATTCATCCTCGACTGCAAATAGAGTTACTTCATCAAAAAGTAAAGTAGGACCAATGTTCCAAGTAACAACTACCAATGCTGTGGGTCCTTTTTTCACATTACCAAAGAGATCGAAGTCAAAGCAATGGTATCACAAAGAAGTGCGGGTCACCAAAAGGATAACCATTTTGGTTATCATTTTGCTCATTTCCTGGATGCCTCTCTATACCATTCGATTTTTACAAATCATTGCTTTGCTCAGAGACCGATGTTGCCTCAAGCACTATAAAGTTTTGTGGAGTGTGATTTTGTCAGCATCTTCATCCGCTTTTAACCCTTGCCTATATGGGGTACTCAATACTCAACTGCGAAATGAATTCTGTCGCCTGATGAGACGGTTCAGAGACTTGTTGATGAACTGTCGTTGCTGTAAG

Transcript

pred2_20782.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03151	TPT	Triose-phosphate Transporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR004853	Domain	Sugar phosphate transporter domain	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050186	Family	Triose Phosphate/Phosphate Translocator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11132	SOLUTE CARRIER FAMILY 35	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005457	Molecular Function	GDP-fucose transmembrane transporter activity	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0015297	Molecular Function	antiporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0036066	Biological Process	protein O-linked fucosylation	Interproscan
GO:0036085	Biological Process	GDP-fucose import into Golgi lumen	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-