| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_20175.1 | - | Sc3x4tf_1745 | 58810 | 67568 | + |
| CDS | |||||
| pred2_20175.1 | |||||
| Transcript |
| pred2_20175.1 |
| Protein |
| pred2_20175.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| PF15785 | SMG1 | Serine/threonine-protein kinase smg-1 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR031559 | Family | Serine/threonine-protein kinase SMG1 | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0016310 | Biological Process | phosphorylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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