Gene detail

Detailed information of pred2_16739.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_16739.1	CELL DIVISION PROTEIN KINASE	Sc3x4tf_455	2604576	2464684	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_16739.1

ATGGCTACCCAAGGGCCGTATGATGTCAGACAGCCACTTGTCCTGCCTGCTGCTGCTTTTGTTAGCAAGATGATGAAGAAGATTAAGAGACGACTCTCTCTTACCATCAGAGGGAGGCATCCCATTGATGAAAGTTTGTCTGAACTTGCCGAAACGCTTTCTTACGACGACAATGGAAGCATTAAGGAAAATGGTGTTGTCCATGAAAACCCTCGGATTGGATCAGATGGTGAGAGTGAAGACATATCAGGAACATCAGATGAAAAAGATGAAATATCCCCTGTAAAGTTACGGGGACGGCCTCGTTATAATGAGGCATTCAACAAGGGCTTCCCTTACTTACCAAGCAGGCAGCTAGACTTGGACATAGAATCAATACGCAGAAAGGAGGCATTGAAGCGTCTCTCTTTGCCTGCAGACATGCGTCTTCCGGAGAATTACCTTGCTCATCAGAGCATTAGTCCAGAGGGTCAACTCAGTCGAAGATCTCGGCGAAAATCTCTGTCTGAAATTGGGTTTGGAAAGATTGAATCTTACCTCAAACTGGATAAGCTGGGCGAGGGTACATATGCTACAGTTTTTAAAGGAAAAAGCAGATTGACTGACAATTTGGTAGCACTGAAAGAAATTCGCCTTGAACATGAGGAAGGGGCACCATGCACAGCTATAAGAGAAGGCAAAGAGTTGAAGCATTCAAACATTGTTACATTACATGACATAATCCATACAGATAAGTCCCTTACTCTAGTCTTTGAATATTTGGGAGATTATGATACCCATGCTATAACAATCATTTTATTCACTTTTATTTTACAGGAAAAGGATCTCAAACAATACATGGATGACTGTGGGAACATCATGAGTATGACAAATGTTACGTTGTTCCTGTTTCAATTGTTACGTGGCTTGGCTTACTGCCACAGACGGCGTGTTTTACATAGAGATTTAAAACCCCAGAACTTACTAATTAATGATCGTGGCGAGTTAAAACTTGCAGATTTTGGACTTGCAAGAGCAAAATCTATACCTACTAAAACTTATTCAAATGAAGTGGTTACGCTGTGGTACCGACCGCCAGATGTTCTACTGGGATCAACAGAATACTCCACCCCTATAGATATGTGGGGAGTGGGTTGTATATTCTACGAAATGGCATGTGGACGGCCGCTGTTCCCAGGTTCAGCAGTTGAGGATGAATTGCATTTAATTTTCAAAATTCTAGGAACTCCCAAAGAAGACACCTTTCCAGGTATTTCTACTCATGAAGACTTCCAGTCCTATAACTTTCCTCATTACGAACCAGAACCATTGTTGAACTTCGCTCCAAGGTTAGACGGTGATGGGTTAGATATGCTGGAAAGGTTTTTAGTGTATGAAGCAAGGAAGAGGATTGGAGCTGCCGAAGCTTTAAAACATCCATTCTTCAAATCTTTAGGACCTAGTGTCCATAAAATTCCTGACACCACGTCAATATTTGCGGTTCCAGGTATTGTTCTACACAGAGATCCTGGCATTCGTTCTTCCTCAGTAGCAACTTCAGCATTCTCCCAAATTAGAGAAAAGACCATCTTACCTGTCACCATCTGCATGGTTACGCAACGAGTGTTGGCAGTGTACTTTGACCCGACTGCTGCTGCTGCTGTGGCTACTGCTGCTGCCATTTTAAAGAAGGTAGTTTGGCAAAATCCCCAGGGCTCCTGGTTGGCTCAATCCTTACCTGCTAAAGAGAGTCAACTAAGTTGACGACTTCAGACTCTCCGCCGAGTAATCTTTAAAGAAAATTCAAATATGTATAACCGAAGGGCGCCTAGAGATGATGACGGTGGCAATTCCATGTTCATGACAATCTCTTCGTCGAGTGTAGGAGCTATTATTGGCAGAAAGGGTTCAAGGATCCGTGAAATGGAACAGAACTCCGGAGCCCGTATCAAGATTCACGACAATGACTCTGATAGCGGAGAAAGAAGAATTGAGATCATGGGAAGCCCCGAGAACCAAGATTCGGCCAGACTTATGATCGAACAGGTTCTTGACGGAACATTTCAAGATAGCTACGACAGTGGCGGCGGCGGCGGTAGAAATTTTCCAGCCATGAAATTGCAACTGACTTTCCTATGCCTGCTGCAGTTCCTATTGCCAAGCCTGGGTGAATACTCCAACCACATCGTCCCATATGAGGAGGAATTCACCATTACTTGTCCTGTTTACCATGACCCCCCATTCCAGCCAAACATTTACTGGCTCTTGCCCTCCACAGAACTTGTCACTTCCAACTATTCAGATGACACTTTTCAAATTTCCGATTATCCTGGAGCAAATCTGACCATCAAGTCAACAACATTGGACACTTTTGGAGTGTACTATTGTTTAGCCGTGTATTCAAACCAGACATTAGACAAGGCAGCTGTGGGAGTCAATGTTGATGTGACACTCTGGCATCTCAAATACAGGTCACAGGTCACCATTGGTCTGATTGCAGCTGCTTGTTTGCTTGTAATTATGGCTGCATTTTGTCTGATCAGTGAGTTTCGATACGAGGAGCCATCCCCCTTAACTGTAATCAAACTCGACGATCCCAAGCTACTTGAAACTTATGAAAATTGCGGCATTAGCTTAACAGATGAGATTGTAGGCAGCCCATCAGCTGAAGAAAACACAAAGACAATAAAAAATTCAAGTATTGAACCATCAAGTAATTTAGAGGAGAATAGCTTG

Transcript

pred2_16739.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR050108	Family	Cyclin-dependent kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24056	CELL DIVISION PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000083	Biological Process	obsolete regulation of transcription involved in G1/S transition of mitotic cell cycle	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004693	Molecular Function	cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-