Detailed information of pred2_14119.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_14119.1TRANSPOSONSc3x4tf_25717133601724891+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHTH
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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