| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_10356.1 | MATRIX METALLOPROTEINASE | Sc3x4tf_883 | 221490 | 222793 | + |
| CDS | |||||
| pred2_10356.1 | |||||
| Transcript |
| pred2_10356.1 |
| Protein |
| pred2_10356.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01471 | PG_binding_1 | Putative peptidoglycan binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002477 | Domain | Peptidoglycan binding-like | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR036365 | Homologous_superfamily | PGBD-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10201 | MATRIX METALLOPROTEINASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0030574 | Biological Process | collagen catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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