Detailed information of pred2_08860.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_08860.1HISTONE H2ASc3x4tf_2724642802496702+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF00542Ribosomal_L12Ribosomal protein L7/L12 C-terminal domainDomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF16320Ribosomal_L12_NRibosomal protein L7/L12 dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002119FamilyHistone H2AInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR008932DomainLarge ribosomal subunit protein bL12, oligomerizationInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR013823DomainLarge ribosomal subunit protein bL12, C-terminalInterproscan
IPR014719Homologous_superfamilyRibosomal protein bL12, C-terminal/adaptor protein ClpS-likeInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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