Gene detail

Detailed information of pred2_03392.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_03392.1	UNCONVENTIONAL MYOSIN-IXB-LIKE PROTEIN	Sc3x4tf_286	1154464	1323344	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_03392.1

ATGGCCATGGGGCTGTGTCGAAACGACCACGGCCTCTGGCCACACATCCATACCACTTCTTTCTTTCAGATAGCCCACATGGCTGGTCTAATTGAATTACAAATTGACATTAAAATGCTTCAGGCATTTTTGGTGTATTCTCACTTCAAGATGGCATTTTGGAAAGCTTTTGGTGAAAAAGATGTCTCTGACATCTTCTCACTGGAAATCCCTGATTTGTCCACTCGTGTAAACCGTAACCAAATGATGGATGTACATGGAGTGTGCCTATATACGGGCCAGTTGAGCTCAGAAAATGACTATGTTATGGTGGAAGCAGAGAAAACCACCCTTGCCGTTGACGTTATCAAGATGGCTGTAAAGAAACTGAAACTCGGCAACCCCGAAAATTTCGAGGTTGCCGAGGTCTTCTGTTCCGGTGGCCAGCTGTGCAAGGAGCGGTGTGTGGAGGCCACCGAGAACCCCGTTCGAATACAACTCCTCTGGCCTAAAGTGCTCAACGAAGACAGTTACTCCGGCCAAGGCTCTACCGGCTACAGATTTTACATCAGAAAAAAAGACGTGGAGTTTAATAGTCGGAGTCTTTCTTGGTTAGATTATAAGCACCCTAGCCCTGTTGATTCTTTCTTAACAACATTCCTGAAGCAACCGACCAGTGATAAGGAGTACCCAGACTTGTGCAGTCTACCAGATTTAAATGAGAAGACACTCTTAGAGAACATCAAAGCAAGGTTTTATAACGGCAATATTTACACTTATGTTGGATCTATTTTGATAGCTGTGAATCCGTTTAAGTTTTTCCCCATCTATAACCCCAAGTATGTAAAGATGTACCAGTACAAATGGCTCGGTGATTTGCCACCCCATATTTTTGCCATAGCAGATGCTGCTTTTTCCACAATGTTACGGACCAAAAAGAATCAATGTATTGTGATATCTGGAGAGTCAGGCTCAGGGAAAACGGAGAGTACCAACCTCCTTCTACATCATTTGACTGCTTTAAGTCAAAAAGGAAATCATGCAACTGGTGTAGAGCAGACGATCCTCGGTGCAGGACCAGTGCTAGAGGCATTTGGAAATGCAAAAACAGTACATAACAATAATTCTAGTCGATTTGGGAAATTTATCCAAGTTAATTACAAGGAATATGGAATGGTCCATGGGAACTACCATGTTTTCTATTACCTCCTCAAAGGAGCTACCGACGAAGAACGGGCACAGCTTCATCTATCAAAAGCCCATGATTATCATTATCTTTCCCAGAGCAACTGCTTTACAGTTGATGGGGTTGATGAAGAACATGAATTTGCTCGATTGAAACAGTCTATGGAAATGGTAGGATTTTCCACTGAAAGGCAAAACAGAATATTTTCTGTCTTGTCTGCTGTTTTGCACCTGGGAAATGTTGAGTTCAAGAAGAAAGGAGATCTCCATCATGATGAGTCTGTGGTTATTAGAAATGAGCAAGTTATCACTGTGATATCTGACCTGTTGAAGGTAAAAGAGAAGACCCTCATCGAAGCCTTAACCCAGAAGAGAACAGTTGCTGGAGGGGAGACAGTGTTTATGAACTACAAATTGGAAGATGCAATTGCTACGAGGGACGCACTTGCAAAATGTTTATATGGTGCGCTGTTTGACTGGATTGTGTTAAAAGTCAACCACGCCCTCCTCGCCAAGCGGCACAACAGTGAACATCAGGTAGACTTCCCCCCTGCCCTGTCTTGCACCCGGTATGATCAGCCTCCCCCTTACACACAGGCAAGTTCAGATCAAGCTGCAGCCGCCGCCATTACTGGGAATTCGATTGGAGTTTTGGACATCTTTGGTTTTGAAGATTTTTACAAGAACAGTTTTGAGCAGTTCTGCATTAATTATGCTAATGAACATCTCCAGTATTACTTCAATCAACACATCTTCAAGTTGGAACAGGAAGAGTACCAACGAGAAGGTATTCAATGGAAAAACATTGAATTTATTGACAATACTGGTTGTCTTGAGCTCTTCTCCAAAAAGCCCAATGGCCTATTTTGTCTGCTGGATGAAGAGTGCAATTTCCCTGGTGCTAGTAATGACACTTTGTTGTCTAAATTCAACCGTCATCACAAGGGCAATCATTACTATGAAGTGCCCCAGTTGCGTGAAGGTGTCTTCGTGGTTGTCCATTATGCTGGGAAAGTGAAATACAGCACAGTGGATTTCCGAGAGAAGAATTCTGATCTCATCCGTACAGACATAGTTGGAGTTCTCAAGAACAGTAGCTCAGCTTTTGTGAAGGAACTGCTAGGTGTTGATCCAGTGGCGATTTTACGTTGGGGTTTATTGAGGGCATTCTTTCGCTGTGTTGCTGCCTTTAATGCTGCTGGAAAAGCATACCAAATGCCTGGAAGAAGCCGTGATAAACCTGTGATCAAACATGATACCACATCATATCTTCATTATCGAGACAATGGTAAACTTAATGATAATTTACTGAGGTCAGATTTGCAAAGGACATGCTGTGGTAATTTGGGAAATAAATTATTTAACAGTTTAGAGAGTGTCCGGCATGCCCGAACAGGAGATGTGCTTCCAGTTAATGGTGTGTCGTCGTCTCCTCGTTCAAAGGAACGACTGACACCAAACAGCCTGCATGATAGACAGCTTCCCAATGTTGCATGTCCTCTCTCTACTAACCACAAATTTGCTGCTGTTGCTGCCGCTGCTACTGTGCCCTGCCCTAATGAGAGCTTGCGTCACTGCAAACCTGCCGACATGACCACAGAAAGTATTCTCACAAGTCCTGTGGAGAGTTTCTTACCTGAAGCTGATGCACTAGTTATCAAGAAAGCCCATCAGAGTTACCGAGATGTACGGACATTGAAGGCGATTGCAACGCGTACGATGATTGGTGGTGGCAGAATACCATTCAAAAAACAACCTCCCAGTGTCAGTGCTCAGTTCCAATGGTCACTATCTCGATTGATGGAAACCCTTAATTATGGCAACCCTTTCTTTGTGCGATGTATCAAGTCCAATTCCGAAAAGGCTCCTTGTCAGTTTGATGATGAGTTGGTTTTGCGTCAGCTACACTACACAGGTATGTTAGCAACAGTGAAGATCAGACAATCGGGTTACAACTACCGGCTCACGTTTGATGAGTTCATTCATCTGTACAAAATCATTCTTCCCAATGGTCTTCTCAGTTCCAAAGAAGATGTGAAAAAGTTCTTGGAAAAAATGGATCTAAATAAGGAAAATTATCAAATAGGAATCACAAAGGTGTTTCTGCGTGAAGTGGAGAAAGTCAAACTTGATGAGGCCTTACACAGAGCCATTATGGGTCGAGTGATTACTATTCAACGATGGATGAAAGCTTTGCTGGAGCGTCAGAATTTCATCAAGCAGCGTGCTGCAGCTCTGAATATTCAGTGCCATGTGAGACGATTCTTGGCTCAGCGTAAGGTGACTGGACTAAAACTGGAGCGTGATGCTGCCATTGTTATCCAGTCTGCTGTGCGCATGATGAGAGCACGAAGGAAATTCTTGATGGTCCAACAGTCTGTTGCACTTGTGCAGCCCTTCATCCGAGGTTCCCTCACTCGAAGAAGGATAACGAGATTGCTGGAAGAAGCTCGTTTGAAGAAGATTGCTGAACACCAAGACAGACAATCATCGACAAGTGACGAAGGTGTATTGACGAAGGGTTCAAGTGCAGAAGAATTGGAACTTGATACAACGGAGCCGCCGCCTTGCCGTGTTCACAGGCACGATTCTGAGGACCAATGCTGCGTCTTGCTTCTTCATCTTCTTCATATTGGCCAGGGGGAAGAATGTCCAGCATTGTTGAGAGAGAAACTTTCAGAAATATGGATTAAAGAATTGGTTACACTGAAAGAACTAGCCACAAAGGAGCTGGTCACAAAAGAGCTAAAGGAA

Transcript

pred2_03392.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR000159	Domain	Ras-associating domain	Interproscan
IPR001609	Domain	Myosin head, motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036023	Domain	Class IX myosin, motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR046987	Family	Unconventional class IX myosin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46184	UNCONVENTIONAL MYOSIN-IXB-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000146	Molecular Function	microfilament motor activity	Interproscan
GO:0003774	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005884	Cellular Component	actin filament	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0016459	Cellular Component	myosin complex	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-