Gene detail

Detailed information of pred2_02167.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_02167.1	SERINE/THREONINE-PROTEIN KINASE NEK	Sc3x4tf_536	4529586	4590898	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_02167.1

ATGGAAGATGTTGAGGTCTCCCTTAATCACTTGGCTGCTGAAGCCTTAGTCTTGGAGCAATTCAGGGAATGGAGGCAGCTGGCACCTCCAGACAACCTTTTGCCGTTATTGGTTTGTTTACGTATCTTGATGCGGGACAGTAATTACCAAACCCTTTTCTTTGAACTGGATGCTGTCAAAAGCCTTGCACAGATTCTCAAAGACAACATTAGCAGTTATGTTGAATATGGGGAAAGACCATTTGTAAGAGACATCCTCAAAGAAATTACAAGTATATTCCACAAGCTTTCCACCACTGCAAAACACAGGGGCTGGCTGTTCGCTGCTGATGTACATAAGTCCTTGGTTATATTGATTTCACTTCCTGATTGCCTGTTGATACACTGTGCCCTTCACGCCCTGATAACCCTGGCTAAGAGCCCTGAACCATGTCAACAAATTGGGAAATTAAATACAGTGGAAACCATTCTGAAGATCATTGAAGAATATGATGGTACCTCCAAAAAATTGGCATCTAACCTTCTGCGTCTTTTGTTGTGTGATGATCCTCAGAGCCGAGAAATGGTGAAGAATTACGAGGGAATTCCTATTTTACTCAGTCAGCTCCACAATTGTGACCCAGAACTTCAATGGGAAGTGGTTTGGTGTTTGGTAAAGCTGAGTGAACAACCTGATGCTCGCCATGAAATTAAGCAGTCGGGTGGCATCCCTTTGTTGCTCTCACTTTTACATTGTGCCACTTCAGATAATTCTGAGATGCACAATCCCAAAATGCTGGAACTGAGCTACTCCCTCAAATCTGCCTGCTGTGCGGCTCTGACTGAACTTGTATTGAATGATACAAATGCCCATCAAATTGTCCAGGCCAATGGCATATACATTTTGGGAGAACTCATTCTGCCCAGACCATATATTCACAAAAAGGAAGCAAAAGCCATTGAGACGTTGCAGAAAAATTCCTTGCGTACATTACGGTTCTTGTTCAGTGTGGAACGGAATCGTCGCTTATTCAAACGCTTGTTTCCTTCTGAAGTTTATGAAATGTTTATTGATGTTGGACATTACAACAAACATTTAGCCAATTACCAACGTTTGGTTGAAAAGATCTCAAGTCTTCCTCCTGAAACTATCCAAGTGATCAAGAATAATGTCCTGGAAACTGACCTGAACAAAAAGCCTGACCAATACATTGGAGATTATGCTGTTTTTGAACTGCTTGGGAGTGGAGGATTTGGTTCTGTGTATAAAGTGAAAAAGACGACTGCTGAACAGTCCTTTTTGGCCATGAAAGAGATTAATATCCAAAGTCCATTGTTTGGTAAGAATGAGATGGAAAGATTCAGCAGTCTTGGAGTAATGATCAGTGAATTGAATATCATCCGAGAACAGTTGCGGCACCAAAATATTGTTCGCTATTATAAAACGTTTCAAATAGATCTCAAGTTGTACATTGTAATGGAACTGATTGAAGGAGCGCCATTAAAAGAACATTTTAATTCTTTGAAGGAAAAGAAACTGAAATTTGAAGAAAACAGAATCTGGAATATCTTCATACAGATGCTGCTAGCTTTACGGTACTTGCACAAGGAGAAAGGCATCGTACATCGGGACTTAACTCCAAATAATGTCATGTTAGGAGAATGTGACAGAGTTACGATCACGGACTTTGGTTTAGCCAAGCGAAATAAAGGCAATCAAACTGGAATGATGTCTGTGGTGGGGACAATCCTATATTCCTGTTGTCTTTCAGTGAAGGCTGAAGATCGTCCTGACGTATCCCAATTAAGTGCCCAAGTAGCAGACAAGATGCTTCTCCACATTGACCTCCTCCAATCCAGAGAAAATGGGTTAAAGAAAAAACTAGATAAAGAACGACGAAGAACCCAAAAGTACGTTTTTGAGGCTGTGAGCAATCGCCAAAATTACCAGAAACTGTTCCTCGCTTCCCAAGAGCATTCTGATCATCTGGTCAATTCCAGTGCCAATTCCAGTGTGAAGGAAGATGATTTTACCAATTCTATTAATTGTGACTGTAATTCTGTGTGTCGAAAGGAACAGCAATTGTGCCAGTCAGAATCTGCTGCTGCTGCTGATGCTGTCCCAGAAATTGACGACCCAGGTGCATGGACGTGTGATGAAGACCTGTGTGTGAGTTGTAGCTGCAACAGTAGCCTGAGTCTGTGCCCTCGGGTGGGAGCCTGCTGTAGTACCAACGCAAGTCACAATAGTTGGCTGAGCAATAGCAGCACTGATGCAGCCGGATCGTCCACGGATAACAATAGTTCGACCAATGTTTCGGGGGTCGACTGTAGTTCTTCCTCTCCAGTTTCTCTGCCCAATGACAATTGCCTCCCCGCCCACAGGTCCCCAAATGTTAACGGAGCCACTGTCTGCAGCCACAGCTCCATGTCACAGTATTCACAGAACTCATCTACCTCACAAAGTCGACAACAACAGCAGCAACAGAAAGATCCTTTGGGCCAACTCTCTTTGCTTATTCCAAATACAGTGAAATCAATAGAAGACTCTGGTTCTCTGTCCCCTGGCAGCCCCGCCCAGGCCAATCACTCCTCCCCTTCGGAAGCCACCCATCTTGGCATCTTGAAACTTGATGATTCCAGGAATTCCAACAACTTTTATCTGTCCAATGGCTCGACCCCAGTTTCCATCCAAAGAGGAAGGCGCACTGGCAGTGGCCATTCTGTAACAGCAGCAGCAGCAGGAGGAGCGGCTTCTCCTGCCACAGTGACCATCTCCCATTGCCGTGTCCGACAAGTCAGCGACCCTATTCTCCAGTTGTTGCACCCCTTGCACAAGATTATCTACATTACCCAGCGTCTTTATTTCGATTGGCTCTTCCAGTTGCCACCACCCCTCCATCCAAACAGAAAGAGACGAGTCATTGAGCAGTTCAAGAGGGCTCTTTTCTCTCCTCACAGTACATCAGACAGCCTCAAAAAAGAACTCAAAAAGTTGTTGACTGGTGCACCTGAGCTAATTGATCTTGGATGCGGACTAACAGATGGTCATTTCCAAGGACCCAACACATTGAATTTCCCTGGACATTCCCCTGGACAAGGATCCTTGGTAAATGGTCAGAAAGAGGAAAATGAAGTGACGAACTGTGAATTGATAGACTGCGAAGTTGGAGTGACTTATGAACAAATGCAAGCAATCATTGAAGGTGCCCTCATAGAAAGTGGATATTACCACATGCCTTCGTTGGTGACAGATTTCTCCTCAACACCCATCAGATCGAATTACTATTCTCGAATACCTAACACAACTACTGCAGCTCATACAAAT

Transcript

pred2_02167.1

ATGGAAGATGTTGAGGTCTCCCTTAATCACTTGGCTGCTGAAGCCTTAGTCTTGGAGCAATTCAGGGAATGGAGGCAGCTGGCACCTCCAGACAACCTTTTGCCGTTATTGGTTTGTTTACGTATCTTGATGCGGGACAGTAATTACCAAACCCTTTTCTTTGAACTGGATGCTGTCAAAAGCCTTGCACAGATTCTCAAAGACAACATTAGCAGTTATGTTGAATATGGGGAAAGACCATTTGTAAGAGACATCCTCAAAGAAATTACAAGTATATTCCACAAGCTTTCCACCACTGCAAAACACAGGGGCTGGCTGTTCGCTGCTGATGTACATAAGTCCTTGGTTATATTGATTTCACTTCCTGATTGCCTGTTGATACACTGTGCCCTTCACGCCCTGATAACCCTGGCTAAGAGCCCTGAACCATGTCAACAAATTGGGAAATTAAATACAGTGGAAACCATTCTGAAGATCATTGAAGAATATGATGGTACCTCCAAAAAATTGGCATCTAACCTTCTGCGTCTTTTGTTGTGTGATGATCCTCAGAGCCGAGAAATGGTGAAGAATTACGAGGGAATTCCTATTTTACTCAGTCAGCTCCACAATTGTGACCCAGAACTTCAATGGGAAGTGGTTTGGTGTTTGGTAAAGCTGAGTGAACAACCTGATGCTCGCCATGAAATTAAGCAGTCGGGTGGCATCCCTTTGTTGCTCTCACTTTTACATTGTGCCACTTCAGATAATTCTGAGATGCACAATCCCAAAATGCTGGAACTGAGCTACTCCCTCAAATCTGCCTGCTGTGCGGCTCTGACTGAACTTGTATTGAATGATACAAATGCCCATCAAATTGTCCAGGCCAATGGCATATACATTTTGGGAGAACTCATTCTGCCCAGACCATATATTCACAAAAAGGAAGCAAAAGCCATTGAGACGTTGCAGAAAAATTCCTTGCGTACATTACGGTTCTTGTTCAGTGTGGAACGGAATCGTCGCTTATTCAAACGCTTGTTTCCTTCTGAAGTTTATGAAATGTTTATTGATGTTGGACATTACAACAAACATTTAGCCAATTACCAACGTTTGGTTGAAAAGATCTCAAGTCTTCCTCCTGAAACTATCCAAGTGATCAAGAATAATGTCCTGGAAACTGACCTGAACAAAAAGCCTGACCAATACATTGGAGATTATGCTGTTTTTGAACTGCTTGGGAGTGGAGGATTTGGTTCTGTGTATAAAGTGAAAAAGACGACTGCTGAACAGTCCTTTTTGGCCATGAAAGAGATTAATATCCAAAGTCCATTGTTTGGTAAGAATGAGATGGAAAGATTCAGCAGTCTTGGAGTAATGATCAGTGAATTGAATATCATCCGAGAACAGTTGCGGCACCAAAATATTGTTCGCTATTATAAAACGTTTCAAATAGATCTCAAGTTGTACATTGTAATGGAACTGATTGAAGGAGCGCCATTAAAAGAACATTTTAATTCTTTGAAGGAAAAGAAACTGAAATTTGAAGAAAACAGAATCTGGAATATCTTCATACAGATGCTGCTAGCTTTACGGTACTTGCACAAGGAGAAAGGCATCGTACATCGGGACTTAACTCCAAATAATGTCATGTTAGGAGAATGTGACAGAGTTACGATCACGGACTTTGGTTTAGCCAAGCGAAATAAAGGCAATCAAACTGGAATGATGTCTGTGGTGGGGACAATCCTATATTCCTGTTGTCTTTCAGTGAAGGCTGAAGATCGTCCTGACGTATCCCAATTAAGTGCCCAAGTAGCAGACAAGATGCTTCTCCACATTGACCTCCTCCAATCCAGAGAAAATGGGTTAAAGAAAAAACTAGATAAAGAACGACGAAGAACCCAAAAGTACGTTTTTGAGGCTGTGAGCAATCGCCAAAATTACCAGAAACTGTTCCTCGCTTCCCAAGAGCATTCTGATCATCTGGTCAATTCCAGTGCCAATTCCAGTGTGAAGGAAGATGATTTTACCAATTCTATTAATTGTGACTGTAATTCTGTGTGTCGAAAGGAACAGCAATTGTGCCAGTCAGAATCTGCTGCTGCTGCTGATGCTGTCCCAGAAATTGACGACCCAGgtgcatggacgtGTGATGAAGACCTGTGTGTGAGTTGTAGCTGCAACAGTAGCCTGAGTCTGTGCCCTCGGGTGGGAGCCTGCTGTAGTACCAACGCAAGTCACAATAGTTGGCTGAGCAATAGCAGCACTGATGCAGCCGGATCGTCCACGGATAACAATAGTTCGACCAATGTTTCGGGGGTCGACTGTAGTTCTTCCTCTCCAGTTTCTCTGCCCAATGACAATTGCCTCCCCGCCCACAGGTCCCCAAATGTTAACGGAGCCACTGTCTGCAGCCACAGCTCCATGTCACAGTATTCACAGAACTCATCTACCTCACAAAGTCGACAACAACAGCAGCAACAGAAAGATCCTTTGGGCCAACTCTCTTTGCTTATTCCAAATACAGTGAAATCAATAGAAGACTCTGGTTCTCTGTCCCCTGGCAGCCCCGCCCAGGCCAATCACTCCTCCCCTTCGGAAGCCACCCATCTTGGCATCTTGAAACTTGATGATTCCAGGAATTCCAACAACTTTTATCTGTCCAATGGCTCGACCCCAGTTTCCATCCAAAGAGGAAGGCGCACTGGCAGTGGCCATTCTGTAACAGCAGCAGCAGCAGGAGGAGCGGCTTCTCCTGCCACAGTGACCATCTCCCATTGCCGTGTCCGACAAGTCAGCGACCCTATTCTCCAGTTGTTGCACCCCTTGCACAAGATTATCTACATTACCCAGCGTCTTTATTTCGATTGGCTCTTCCAGTTGCCACCACCCCTCCATCCAAACAGAAAGAGACGAGTCATTGAGCAGTTCAAGAGGGCTCTTTTCTCTCCTCACAGTACATCAGACAGCCTCAAAAAAGAACTCAAAAAGTTGTTGACTGGTGCACCTGAGCTAATTGATCTTGGATGCGGACTAACAGATGGTCATTTCCAAGGACCCAACACATTGAATTTCCCTGGACATTCCCCTGGACAAGGATCCTTGGTAAATGGTCAGAAAGAGGAAAATGAAGTGACGAACTGTGAATTGATAGACTGCGAAGTTGGAGTGACTTATGAACAAATGCAAGCAATCATTGAAGGTGCCCTCATAGAAAGTGGATATTACCACATGCCTTCGTTGGTGACAGATTTCTCCTCAACACCCATCAGATCGAATTACTATTCTCGAATACCTAACACAACTACTGCAGCTCATACAAATTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225	Repeat	Armadillo	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050660	Family	NEK Serine/Threonine Protein Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43671	SERINE/THREONINE-PROTEIN KINASE NEK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0043406	Biological Process	positive regulation of MAP kinase activity	Interproscan
GO:1902749	Biological Process	regulation of cell cycle G2/M phase transition	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-