| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_01566.1 | COILIN P80 | Sc3x4tf_143 | 7262983 | 7308628 | + |
| CDS | |||||
| pred2_01566.1 | |||||
| Transcript |
| pred2_01566.1 |
| Protein |
| pred2_01566.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01248 | Ribosomal_L7Ae | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | Domain | Interproscan |
| PF15862 | Coilin_N | Coilin N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002415 | Family | H/ACA ribonucleoprotein complex, subunit Nhp2-like | Interproscan |
| IPR004038 | Domain | Ribosomal protein eL8/eL30/eS12/Gadd45 | Interproscan |
| IPR018492 | Family | Ribosomal protein eL8/Nhp2 family | Interproscan |
| IPR024822 | Family | Coilin | Interproscan |
| IPR029064 | Homologous_superfamily | Ribosomal protein eL30-like superfamily | Interproscan |
| IPR031722 | Domain | Coilin, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15197 | COILIN P80 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000387 | Biological Process | spliceosomal snRNP assembly | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0015030 | Cellular Component | Cajal body | Interproscan |
| GO:0030619 | Molecular Function | U1 snRNA binding | Interproscan |
| GO:0030620 | Molecular Function | U2 snRNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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