Detailed information of pred2_00840.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_00840.1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Sc3x4tf_13729884492959739-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF02978SRP_SPBSignal peptide binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004125DomainSignal recognition particle, SRP54 subunit, M-domainInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036891Homologous_superfamilySignal recognition particle, SRP54 subunit, M-domain superfamilyInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005786Cellular Componentsignal recognition particle, endoplasmic reticulum targetingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0006616Biological ProcessSRP-dependent cotranslational protein targeting to membrane, translocationInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030942Molecular Functionendoplasmic reticulum signal peptide bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP