| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_00051.1 | RNA RECOGNITION RRM/RNP DOMAIN | Sc3x4tf_164 | 207344 | 163017 | - |
| CDS | |||||
| pred2_00051.1 | |||||
| Transcript |
| pred2_00051.1 |
| Protein |
| pred2_00051.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF01480 | PWI | PWI domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR002483 | Domain | PWI domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR045137 | Family | RNA-binding protein 26/27 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14398 | RNA RECOGNITION RRM/RNP DOMAIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
