Gene detail

Detailed information of mRNA.BJAM.scaffold5943.17716 in Bathynomus jamesi Gene info

Gene ID	Annotation	Contig	Start	End	Strand
mRNA.BJAM.scaffold5943.17716	SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED	scaffold5943	19174	28161	+

Gene Structure

More details in Jbrowse Sequence

CDS

mRNA.BJAM.scaffold5943.17716

ATGTTTGGAAAGAAAAAGAAGAAACCTCAGATATCTGCCCCGAGTAACTTTGAGCATCGGGTTCATACTGGATTTGACCATCAAGAAGGAAAATATGTTGGGCTCCCTCCTCAATGGCAAGGGATTGTCTCTAATGCACTGGATAAATGTCGACCCATGCCCTTAGTTGATCCTTCCCAAATTACACCAGTGGAAACTATGGATCTCAAGATTCTCAATCCTGATCCTATTGGGTACCTACCCAATAGGATCAGGACTGAGAATCCACAGGAGACTCTCCAGCGCTTCGACCATGGCCCTCTTGATGTTCAGGGGAACTGCACACCATTGAATCGAGATCGCCACGGGAGTAATTACAACCTGAGCACAAATACAACAGGCACTAACAACAACAATACCACCATCACCAACAATAATAATAATAATAATAATAATGGCAGCATTTCGAGGCTCCCGAAAACCTCTTCTGTGGCCAGATCCAACTCTTTAAGATCGTCGAGCCCACCGCGGTTACGGAGACCCGATCAGTGGCCAGGCCCGCTCCCACCCACGCTTCATGAGGAAGAAGTGCTAGAAACATCACAGTGGGGGGCTGGGTATCCTCCTCATTTAGGTCCCCATGGTTCACAACACCATCCAGGACACTTGCAACAAAACCCCTACCCTCAGGGGCATCCAATGCATGCTGTGGGTCCTCTCCATCCACAGCAAATACCTAAAGGGTCTCCGAGTGGGCCATACTCTGTGGCCCCCCATAAAGGGTACTTCCACCATCCCCAGCAAGCCCACCAACACCCTCAGGGTGTGACCAATGGAGTGAGACCTCACCCAGACAACATCCACACAGAGTACCACCACGAAGGAATGAGCCATACTTGGCCAGGCCATGGGGAGAGAGGGGATACTGGGGACTCCCACCTCATTAAAACTCCATCGGGTCCCCCCTCTGGAGGGTCGGCAGGAAGTAGCAGTGGGGGTAGGCATGGTCCCACCCCCCCGCCTCAGCATCACCACCACATAGTACAAAACGGTCATTTACCTCAGCATTCTCAGTGGAAGACCCCCGGCACAGATCCCCTCAGACTATCAGATGAAGTACCACCAACTAAGCCCTCCCCCCGTTCCACCTCACACTGGCCACCTGGGCATCCCATGGGTCCGCATCAAATGCCCCATCAACCACAATTCCCTCACCATCAGTATCCCCACCCACAGCATTTCCAAGGGCAAAGACCCACCCAGCATCTTCCTCCCCACAGCAGACCCCCACAACCACTGCCGCCACCTCAGAATCAGCAGCAGCAGCAGCAGCAGCATCCTCACAGTGGACCAAGACCTCATCCTGCAGGTCCTCACCAGCCCTTTGGGCCTTCCTACAAACCTTTGCAGCAAGTGATGCCGCCAGAACAGAGTCCAAACTCGACCAAGGGGTCAACTAGTAGCAGTAACCTCAACCTGAACACCAGTGGGACCAATTTAAACCGACACCCCAACCTCGGCCAACAATACCATGACCATCAGGTTCACCCAGATCCCAATGGCAACCAGTTTGGAGGGGAACAAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCCCTGGGACCACCTCAGATGTCCCCCCCTCCCATTCCTCCCCATTCACATGAGCGAAGTCGGTCTTCATTTGATGGAGGAATCGGTGGCAGTAGCTCTGGCGGTTCGAACCCCAACATCGGACCCCATAAATCTCAACCCACACACCTCGCCCACCATGGAGTAAAACAGCACGAGCAGCAGAGGTTATCTCATGAACAGTTTCGAGCCGCTTTGCAAATGGTGGTGTCCTCTGAAGACCCTAGAAATAATTTGGAAAACTTCATCAAGATCGGAGAGGGATCCACGGGAATCGTTTGCATAGGAACTGAAAAATCTAGTGGTAGACAGGTGGCCGTGAAAAAGATGGATCTCCGGAAGCAGCAACGACGGGAACTCTTGTTCAACGAGGTGGTAATCATGAGGGACTATCACCACCCGAACATCGTCGAGATGTATGATTCCTACCTCGTGGATGATGAACTGTGGGTCGTGATGGAGTTTCTGGAAGGGGGCGCTCTCACAGACATTGTAACCCACGCCAGAATGGACGAGGAACAGATTGCGACGGTTAGATATACACAAATTAAAAAAAAGTCTTCGAAATAA

Transcript

mRNA.BJAM.scaffold5943.17716

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00786	PBD	P21-Rho-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000095	Domain	CRIB domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR033923	Domain	p21 activated kinase binding domain	Interproscan
IPR036936	Homologous_superfamily	CRIB domain superfamily	Interproscan
IPR051931	Family	Serine/Threonine and Tyrosine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45832	SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-