Detailed information of mRNA.BJAM.scaffold5476.17129 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold5476.17129CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pscaffold5476163733165310+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06807Clp1Pre-mRNA cleavage complex II protein Clp1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR010655DomainPre-mRNA cleavage complex subunit Clp1, C-terminalInterproscan
IPR038238Homologous_superfamilyClp1, C-terminal domain superfamilyInterproscan
IPR045116FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0051731Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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