Gene detail

Detailed information of mRNA.BJAM.scaffold5196.16745 in Bathynomus jamesi Gene info

Gene ID	Annotation	Contig	Start	End	Strand
mRNA.BJAM.scaffold5196.16745	LARVAL STORAGE PROTEIN/PHENOLOXIDASE	scaffold5196	234948	261554	-

Gene Structure

More details in Jbrowse Sequence

CDS

mRNA.BJAM.scaffold5196.16745

ATGAAGGTATTTGTGATATTACTACTCGTGGCTTTTGCCTCAGCGTCTTGGTTACCAGGCTACCAGAGCGACGAAAACCCATCAACGGCGAAACGGCAGCAGGATATTCTCCACCTCCTCTTCAAGATAAATGAACCTATCCGTGATAGATTTGCAGATCTTAAAGATGCAGCAAAGAACTTCCATCCAACTGCTGATCTCTCACACTACAAGGATGGAGGAGACGCTGTGAAGCACCTCCAAGACGAAGTTGATCATCACCATATGTTAGAACAACATCACTGGTTTTCTCTTTTCAACGAACGTCATCGGGAAGAAGCTCTTATGCTTTTCGAGGTTTTGACGAGTTGCAAGGACTGGAACACAGCCATAGCTAATGCTGCTTACTTCCGAGAGAGAGTTAATGAGGGAGTGTTTGTATATGCAATTTACACTGCTGTCATCCATTGCGAACTTGGAAAAGATCTTGTGCTTCCACCTCTGTACGAAATCACCCCACACTTGTTCACCAATTCTGAAGTTATCAGGAAAGCTTACTCAGCCAAGATGACACAAACGCCCGGAAAGTTCCACATGGCCTTCACTGGCACCAAGAAAAATCCCGAGCAAAGAGTCGCCTACTTCGGTGAAGATATCGGTTTGAATGTTCATCACGTCACCTGGCATATGGATTATCCCTTCTGGTGGAAGGATTCCTACGGCTACCATCTTGACCGCAAGGGAGAACTTTTCTTCTGGGTCCATCATCAACTTACCGTTCGATTCGATGCCGAAAGACTTTCCAACCACTTGTACATGGTAGATGAGCTTCACTGGGACAGACCAATCAAGGATGGATTTGCTCCCCACACTATGTACAAATACGGAGGAGAATTTCCCTCTCGTCAAGACCATGTTCATTTCGAAGATGTAGATGGTGTCGCCCGAATTCGTGACATGATCATCATTGAAAGCAGAATTCGTGATGCAATTGCTCACGGATACGTCACGGCTAAGGATGGAGATAAAATTGATATCAGAAACGAACACGGCATTGACGTCCTCGGTGATGTTATTGAATCCTCCACCTACAGTCCAAACACTCCATATTATAGTGCTCTTCACAACCTTGCTCACGTTATTCTTGGTCGTCAAGGAGATCCCCATGGAAAGTTCAACATGCCCCCAGGTGTTATGGAGCACTTCGAAACTTCCACCAGAGATCCAGCTTTCTTCCGACTTCACAAATACATGGATCACATCTTCAAGGAACACAAGGACTCTCTTCCTCCATACACAAAGGAAGAAGTTGAATTCCACGATGTTGCTATCAATTCCGTCGAAATTAAGGGAAAACTCGAGACCTTCTTCGAAGATTTCGAATTTGACTTGAAAATGGCTGTTGACGATACTCCAGAAGTTCAAGATGTTCCCATTTCTGCCATTGTATCTCGTCTTAACCACGATCCCTTCACTCTGAATGTCGATGTTACTAACAACAATGCAGGTGATGTGTTTGCCACAGTCCGTGTATTCCTTTGCCCAAGATACGATGGCAATGGCATCCTTTTCCACCTCAACGAAGGACGTTGGCACTGCATTGAAATCGACAAATTCTGGAAAACTTTGAAATCAGGCCCCAATCTTTTGGAAAGGAGCTCCTCTGATGCTTCAACTACTGTCCCTGACATACCTAGCTATCACACCCTCGTCGAGAAGGCTGACGCCGCTGTTGCAGCTGGGAAAGATCTTCATCTTGAAGAATTCTCTCGTAGCTGTGGTATTCCCAACCGATTGCTCCTTCCTAAGGGTAAACCCGAAGGTATGGAGTTCGCTCTCTTTGTTGCCATTACTGATGGTACCAAGGACGCTGCTATTGAAGGGCTCGATAAAGATGAACACGGAGGAACCCATGCCCAGTGCGGTATCCATGGAGAGATTTATCCCGACAAACGACCTCTTGGATATCCCCTTGACCGTCAACTTCATGACGATGACATTATTGAGCATTTCCCTAATTTACACAAGAGCATTGTCACAATCACCCACAATGAACATCATGAGGACCATCACTAA

Transcript

mRNA.BJAM.scaffold5196.16745

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00372	Hemocyanin_M	Hemocyanin, copper containing domain	Domain	Interproscan
PF03722	Hemocyanin_N	Hemocyanin, all-alpha domain	Domain	Interproscan
PF03723	Hemocyanin_C	Hemocyanin, ig-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000896	Domain	Hemocyanin/hexamerin middle domain	Interproscan
IPR002227	Domain	Tyrosinase copper-binding domain	Interproscan
IPR005203	Domain	Hemocyanin, C-terminal	Interproscan
IPR005204	Domain	Hemocyanin, N-terminal	Interproscan
IPR008922	Homologous_superfamily	Di-copper centre-containing domain superfamily	Interproscan
IPR013788	Family	Hemocyanin/hexamerin	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR036697	Homologous_superfamily	Hemocyanin, N-terminal domain superfamily	Interproscan
IPR037020	Homologous_superfamily	Hemocyanin, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11511	LARVAL STORAGE PROTEIN/PHENOLOXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-