| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| mRNA.BJAM.scaffold4752.16117 | BRCA1-ASSOCIATED PROTEIN | scaffold4752 | 224101 | 226099 | + |
| CDS | |||||
| mRNA.BJAM.scaffold4752.16117 | |||||
| Transcript |
| mRNA.BJAM.scaffold4752.16117 |
| Protein |
| mRNA.BJAM.scaffold4752.16117 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|ZnF|ZnF_UBP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02148 | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001607 | Domain | Zinc finger, UBP-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24007 | BRCA1-ASSOCIATED PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0007265 | Biological Process | Ras protein signal transduction | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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