Detailed information of mRNA.BJAM.scaffold2923.12673 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold2923.12673DNA LIGASE 1/3 FAMILY MEMBERscaffold2923444873456548-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00645zf-PARPPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger regionDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001510DomainZinc finger, PARP-typeInterproscan
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan
IPR036957Homologous_superfamilyZinc finger, PARP-type superfamilyInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006288Biological Processbase-excision repair, DNA ligationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0070421Cellular ComponentDNA ligase III-XRCC1 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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