Detailed information of mRNA.BJAM.scaffold283.2146 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold283.2146MADS BOX PROTEINscaffold283726234737916+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilySRF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan
PF12347HJURP_CHolliday junction regulator protein family C-terminal repeatDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002100DomainTranscription factor, MADS-boxInterproscan
IPR022102DomainHolliday junction regulator protein family C-terminalInterproscan
IPR036879Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11945MADS BOX PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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