Detailed information of gene29747.t1 in Actinoscyphia liui

Genomic Location: chr10:19452209...19486432
NR annotation: CAH3121144.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96GD3Polycomb protein SCMH1 OS=Homo sapiens OX=9606 GN=SCMH1 PE=1 SV=1
Q8K214Polycomb protein SCMH1 OS=Mus musculus OX=10090 GN=Scmh1 PE=1 SV=1
Q9UQR0Sex comb on midleg-like protein 2 OS=Homo sapiens OX=9606 GN=SCML2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02820MBTmbt repeatDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF12140SLEDSLED domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR021987DomainSLED domainInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR038348Homologous_superfamilySLED domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11461SCMH1; polycomb protein SCMH1-Chromosome and associated proteinsko03036deepkoala

TOP