Detailed information of gene29566.t2 in Actinoscyphia liui

Genomic Location: chr10:16176325...16191455
NR annotation: XP_031567624.1, cullin-5-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JJ31Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3
Q93034Cullin-5 OS=Homo sapiens OX=9606 GN=CUL5 PE=1 SV=4
Q5RB36Cullin-5 OS=Pongo abelii OX=9601 GN=CUL5 PE=2 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|Cullin

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00888CullinCullin familyRepeatInterproscan
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR016158DomainCullin homology domainInterproscan
IPR036317Homologous_superfamilyCullin homology domain superfamilyInterproscan
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR016159Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan
IPR045093FamilyCullinInterproscan
IPR001373DomainCullin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11932CULLINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031466Cellular ComponentCul5-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10612CUL5; cullin 5-DNA repair and recombination proteinsko03400deepkoala

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