Detailed information of gene29340.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene29340.t1U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10chr101180443411805090+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR047575DomainSm domainInterproscan
IPR052840FamilyU7 snRNA-associated Sm-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21196U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006398Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan
GO:0071208Molecular Functionhistone pre-mRNA DCP bindingInterproscan
GO:0071209Molecular FunctionU7 snRNA bindingInterproscan
GO:0071254Cellular Componentcytoplasmic U snRNP bodyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP