Detailed information of gene29232.t1 in Actinoscyphia liui

Genomic Location: chr10:9793484...9814133
NR annotation: XP_031567611.1, lysine-specific histone demethylase 1A-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6ZQ88Lysine-specific histone demethylase 1A OS=Mus musculus OX=10090 GN=Kdm1a PE=1 SV=2
O60341Lysine-specific histone demethylase 1A OS=Homo sapiens OX=9606 GN=KDM1A PE=1 SV=2
Q9VW97Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)3-3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04433SWIRMSWIRM domainDomainInterproscan
PF01593Amino_oxidaseFlavin containing amine oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR017366FamilyLysine-specific histone demethylaseInterproscan
IPR050281FamilyFlavin monoamine oxidase and related enzymesInterproscan
IPR002937DomainAmine oxidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10742FLAVIN MONOAMINE OXIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11450KDM1A, AOF2, LSD1; [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylaseEC:1.14.99.66
Chromosome and associated proteinsko03036deepkoala

TOP