Detailed information of gene29052.t1 in Actinoscyphia liui

Genomic Location: chr10:5971039...5979537
NR annotation: XP_020902248.1, pseudouridylate synthase 7 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PZ0Pseudouridylate synthase 7 homolog OS=Homo sapiens OX=9606 GN=PUS7 PE=1 SV=2
Q08DI8Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN=PUS7 PE=2 SV=1
Q91VU7Pseudouridylate synthase 7 homolog OS=Mus musculus OX=10090 GN=Pus7 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01142TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011760DomainPseudouridine synthase, TruD, insertion domainInterproscan
IPR001656FamilyPseudouridine synthase, TruDInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR042214Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13326TRNA PSEUDOURIDINE SYNTHASE DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06176truD, PUS7; tRNA pseudouridine13 synthaseEC:5.4.99.27
Transfer RNA biogenesisko03016deepkoala

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