Gene detail

Detailed information of gene28178.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene28178.t1	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	chr9	10120341	10149448	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene28178.t1

CTACAATCGGGTGCTTGTGTTTTGGCCGAGTCTCTACCAACAAAATGGGCAGTTTACGGGAGTTGCAGCACGCGCTGCAGGAAAAGAATAGTGAATTAAAGATGAAGGATTCCAGGATCATGGCTCTGGAACAAGAGCTGAGGCGTAAAGACGAACTCGTTCGAAAATTGGAGAGCGAGCTAGATAAGTATCGATCAGTTCTGCAACCAGCGAGTGGTACTTCAAACGCTGCCGGAGGACGAGCTAGGAATAAAAGACAAGGCATCTCGGCAGAGCCTCAAAGCGCCAAAGCCCTCGCCGAAGCATCGAAGCCGCTGCAACGACATAGCAAAACATCAAGATCAAAAGAACTCATAAAAGATGCAATTCTTGACAATGATTTTCTCAAAAACCTGGAAGCGTCACAGATTAAAGAGGTTGTTGAGTGTATGTTTGAGAAACAGTTTAAAAGAGATGAGTACATTATCAAGGAAGGCGACCCAGGCTCTCATTTATATGTCTTAGAGGAGGGAAAATGTCAAGTCACTAAAGAGGGTTCAGTTCTTGGTCACATGGGACCTGGAAAGGCTTTTGGTGAACTGGCCATCTTGTATAACTGTACAAGAACTGCTAGTGTGAGAGCTCAGACATCAGTCAAACTATGGGCCATAGATCGACAAACCTTTCAGACCATCATGATGAAGACTGGTCTCATGAGACAAGCAGAACATATGGAATTTTTGAAAAGTGTTCAGCTGCTCAGGGAATTGCCTGAGTCTTATCTTCTTAAAATTGCTGATGTAATTGAAGAGGCTTATTATGAAGAAGGTGAATTTATTATTCGGCAAGGTGCTAGAGGAGATACGTTCTTCATTATCAAAAAAGGAAAGGTTGATATTACTCAGAGAAAGTCTGTACATTCTGATCCTGTTTTTGTGAGGTCTCTCCCCAAAGGAAGTTATTTTGGTGAAAAGGCTCTGAAAGGGGAAGACCTCCGAACGGCTAACTGCATTGCAGGTCAGGGGGGTGTCACCTGCCTTGTACTAGATAGAGAAGCTTTCACTCAGTTTATTGGTAGTTTAGATGAAATTCAAAAAGACAAGTATGATGATTCTCAACGAGGGGTTGATCCCACTACTGCAAGTCGATTAAGGGAGAAGGAGGAAGAGTTTGCTAATGTTAGACTAGAAGACTTAACACTTGTCAAGACTTTAGGTGTTGGTGGATTTGGTCGAGTAGAGCTGGTTCAACTTGCTGGTGACAAGAGAACGTTTGCTCTAAAGACCTTAAAAAAGCACCACATTGTAGAGACTAGACAACAAGATCACATCATGTCTGAGAAAAAGATTATGATGGAGTCCAATTCTGGATTCATAGTTAGATTGCATAAAACATTTAAAGATAACAAGTATTTGTACATGTTATTAGAAGCTTGTTTAGGAGGTGAACTGTGGACGATTCTACGGGATAAAGGGTCATTCGATGATCCCACTACTAGGTTCTATGTTGGTTGTGTAATAGAAGCCTTCCAGTATTTACATGCCAGAGGAATAGTGTACAGAGATCTGAAGCCAGAGAACCTTCTTTTAGACTCCAAAGGCTATTGTAAATTGGTCGATTTCGGTTTCGCTAAGAAAATTGGTTTTGGACGCAAGACGTGGACATTTTGCGGTACTCCAGAATACGTAGCACCAGAGATTATTCTCAATAAGGGCCATGACTTATCTGCTGATTACTGGTCGTTAGGAATTTTGATGTATGAGCTTCTCACAGGAAGCCCTCCATTCACGGGAACAGATCCCATGAAAACCTACAACATCATTTTGAAAGGCATAGATATGATTGAATTCCCTCGCAAGATAACGCGGAACGCGCATGCGCTGATCAAGAAGCTCTGTCGCGATAACCCAGTTGAACGTCTTGGGTACCAGAAAGGTGGACTCAAGGATATCATGAAACACAAATGGTTTGATGGCTACAATTGGGATGGACTAAGAAACAGAAAGATAAACCCGCCTATTGTACCTAAGATCAAATCCCCAACAGACGCGTCGAACTTCGACGATTACCCACCCGATGACGAAGTACCACCCAACGACTCAACTGGATGGGATAAGGATTTCTAAGAAACAAAGCCTTACAGCATATCTCGTGTATACTATCATATCTGTGATAATATGAACGAGATATGGCCAGATATCAACGACTCAACTGGATGGGATAAGGATTTCTAAGAAACAAAGCCTTACAGCATATCTCGTGTATACTATCATATCTGATAATATGAACGATATATGGCCAGATATCAACGACTCAACTGGATGGGATAAGGATTTCTAAGAAGCAAAGCCTTACAGCATATCTCGTGTATACTATCATATCTGTGATAATATGAACGAGATATGATCAGGATGTACAGCAGGGGAGAATGTATTGCCTACCTTACCTGACCACGCCTTTCTTACCCGACACTAGCTTCCTATAGACTGCAAAGGAATATCAAGTAGTGTATTTTTAGGGCGTGAATTGTGTGACACTTATGAATGGTGTCACGTGAATGCTATGACGCGTGCGTGTCGCTTCAAACGAGGTTGCGTTACTCAAAGTTGTACCTTATCTGCATCCATGAAGACTGTAACGGAAACACTGTAGAATTACACGAATTTTTAAATCTAACTTGCCTTCTAGTACATGGCAAGTATTTTAGAATCAATCCCTTGACAATCAACAGATAAAGACGCGGCGGCCATGTTGGATGAACAAATAAAGAACGGTAATAACAAATCTTGGCTCTTTCTTCGTGTGTCGCAAATTCTATGACAGATAACAATTAGGCTCACTCGATTTCTTTGGGCAGATAATCTGCTAGTACTCTATTGTAAACAAGACCATGTTTTGGTGACTTTTTTTGCGCTTTTCTCCCCCAAAAAGCCGGCTTTTCTCCACTCGCTATCTATTGGCTGATAGAATGCGGGATTTGCAATATAATAGTAGATTTTTACTAATCTGTGCTAGGCTTGTTCTATTGTTTCCATCGTTCGAGACATTCTGAAAAATTGGTTTTATCTGAAAAATGAGTTTACAGTTAAAATTGTGAAGTTTCATATAGATCGCACGTAAACTATCGAATATATCGATTTTTCAAAACATGAAATTTTACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000961	Domain	AGC-kinase, C-terminal	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR035014	Domain	cGMP-dependent protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24353	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004692	Molecular Function	cGMP-dependent protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-