Detailed information of gene28094.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene28094.t1SODIUM/CALCIUM EXCHANGERchr987083308725888-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR051171FamilyCalcium/Cation AntiporterInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005432Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794Cellular ComponentpostsynapseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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