Gene detail

Detailed information of gene27922.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene27922.t1	ACETYL-COA CARBOXYLASE, ISOFORM A	chr9	6042487	6073434	+

Gene Structure

More details in Jbrowse Sequence

CDS

gene27922.t1

ATGTTGGCATCCATATCTGGTCGAATCCCACCCTCTGTAGAAGAATCCATCAAGAAACACCTTGCTAACTATGCCAGCAACCTGACATCGTTACTCAACCAATTCCCTAGTCAACAAATTGCCAATGTAGTGGATGCTCATGCCGCCACCTTAACAAAGAGAGAAGAGAGAGACGCCTTCTTTCTGAATACACAATTAATTGTACAATTAGTACAAAAGTATCGTAATGGTGTACGTGGTCATCTCAAAGCTGTAGTTCTTGGACTGTTAAGACAGTACCTACAAAATGAGGTCTTGTTCAGTGAAGGTACACAAATTATAACAAATTTTGAGATCCTTATTACAATGATGATGATGATGGTGATGATGATGGTGACGATGATGGTGATGATGATGATGATGGTGACGATGATGATGATGATGGTGATGATGATGATGGTGATGATGATGATGGTGATGATGATGGTGACGATGATGATGACGATGGGTGATGACGATGGTGATGGTGATGGTGATGGTGATGATGTTGATGATGATGACGATGATGATGATGATGATGACGACGACGACGACGACGACGATGATGGTGACGATGATGGTGACGATGATGATGGTGATGATGATGGTGGGAATTTTGAGAAATGCATTACGCTTCTCCGCGACAAACACAAGAAAAGCGACCTTGCCTTTGTCATCTCCTCTGTGTTTTCTCACGCCAATGTTGCCAAGAAGAACACCCTGACTATCTTTCTCATCGACCATTTATGTGGCCGTGAAGCTGGACTTTCTGATGAACTTAAAGAATTGCTGCAGGATCTAACATCACTGAACAGACCTGAGCATTCTAAGGTTGCACTGAGGGCCAGACAAGCTCTGCTGGCCTCACAACAGCCATCCTATGAACGACGTCACAATCAAATTGAATCATTATTCCTGTCAGCGGTTGACATCATGGGGAACCAGGCTGCTCCAGAAAACCTTCAAAAACTCATCCTCTCTGAGACAGCAATATTTGACATGCTTCCAAGTTTCTTCTATCATTCCAATGATGCTGTGAGAACAGCAGCGCTAGAGGTATATATTCGACGTAGTTATCAAGCGTACGAGCTCCATACTCTATACCATGATCAGCTTGTGGGGAATGTATCCATTGTGGAGTTTCAGTTTTCTCTGCCAAGCAATCATCCCCACTGGACACAAAACAAAGTTCCATCAAGCAAGACCGTCCTGGCTATGCCAAGGGTTCGCAGTCTTAGTGAAGACCTGTTTGGCCTGGTTTATCATCAGACATTACCTTGTAGTCGTACTGGCATAATGGCTGCTTTTGCATCAATAAAAGAACTAGATAAGAATTTTCATCTTGTCATGGATAGGTTCCAGGCCTCCACCGAGGTTGTACCACGGTCAGCAAAACCCTTCAAAAGGGTGGGGTCTCTGTCGTCATATGATGAAATTAGGCAGCATGCACAGTACAAGCAGTGTGAAGAAGAACCTATCCATATTGTCAACGTTGCTGTTCTCATCGGAAACAACCAGGATATAGAAGAATGCCAGAAACATGTCAGTGAGTTCACGAATTCCAAGAAAGCGATTCTCAAGGAGAAAGCAATTCGTCGCATCACTTTTTTGATGTGCGATGGAAAGGGGGGATTCCCGTGGTTCTTCACGTTCCGTGCCAATGATAACTTTGAGGAAGATAAAATCTACCGCCATCTTGAACCTGCTCTTGCCTTCCAACTTGAAATTAATCGTCTCAGGAATTTTGACTTAGATCTTATTCCAACTACCAATCATAATATTCACCTGTACTTTGGTTCTGCCAAGAAGCTATCCAACAACACTGAAGTGACAGACTACCGTTTCTTTATTCGTACCATAATCAGACATTCTGATTTCGTAACCAAGGAAGCGTCGTTTGAGTACATGGAGAAAGAAAGCGAGATCCAACTGTTGGAGGCTTTGGATCAGATGGAAGTGTTCTTTTCTGAAAGTCCCAAGAGAACGGACTGTAACCACATCTTTTTACACTTTGTTCCTTGTGTTATCATTGAACCTGACAGGATTGAGGAGAGTATTCGTCACATTGTCATGCGATATGGTCGTAGACTGTGGGCTTTAAGAGTTCTAAAAGCAGAGATTAAAGTCAATATCAGGCTTACCCCTACAGGAGTCATCACTCCACTACGAATGCTCATCTCTAATGAGTCTGGTTACTACCTTGACTTCTGTACCTACAAGGAAGTAGTTGACCCACAAACAGGAGAGAGAGTATTTGAGACATATGGTCCAAAGAGAGGTCCTTTTCATGGGCTACCAACGTCAACCCCTTACGTGACTAAAGACCATTTACAATTGAAGCGATTCAGAGCTCAGTCCTTGAGCACTACCTACGTGTATGATTTCCCAGAGCTCTTCAGACAGGCAATTATCAAGATGTGGAAGAAGTTTGCCAAGTACTCCCCTGAAGAAGTCCAACTACCACGTAACGTGATGAATGTTACTGAGTATGTTTTGGATGGAAACAATAAGTTGGAGGCGATTTCACGTGTGTCTGGAGAAAACACGTCCGGCATTATTGTATGGAAGATCGAGTGTTGTACTCCAGAATGTTATCCTGCAAAGCGAGAGTTCATTATCGTAGCCAATGACATCACACACATGATTGGATCGTTTGCTACTGAAGAGGACATGCTATTTAAGCGTGCGTCTGAGATGGCTCGTGCCAAAGGAATCCCACTGGTGTACATATCAGCCAACAGTGGTGCACGTATAGGCGTGGCTGAGGAAGTTAGACACTTGTTCAGGGTGGCTTGGAATGACAAAAATGCACCTGAAAAGGGCTTCAAGTACATCTATGTTACTCCAAGCGAATTTAAGAAGCTTAGTGCAACCAATTCAATCCATGCCGAACATATACAAGACGATGGAGAAGATCGCTACAAAATAACCGATATACTAGGTAGTGAAGATGGTATCGGTGTAGAAAACCTCAGGGGTTCAGGGATGATCGCAGGGGAGATGTCTGCTGCTTACAACGAAATCGTTACCATCAGTCTGGTAACGTGCCGTGCAGTTGGAATTGGTTCGTATCTTGTCCGTCTTGGTCAGAGAGTCATTCAGACAGAAAATTCACATTTGATTCTCACTGGATACAATGCCTTGAACAAGGTTCTTGGTCGTCAAGTTTACAGCTCCAACCTGCAACTTGGAGGACCACAAATCATGCACAATAATGGTACTTCACATCTTGTCGTACAAGACGATTTTAGCGGCGTCGCTGCAGTGATGGAGTGGCTTGCATTTGTGCCAATGGTTCACAATGGACCTTTGCCAATACTTAAAACACGGGATCCTATCGACAGAGATGTGGAGTTCCTTCCAACCAAGGCACCTTACAATCCTAGACATTTTATATGTGGCTGTCCTAATCCTGAGAAACAAGAACAGTGGATCAGTGGATTTTTTGACAAGGACTCGTTCGTTGAAACCATGGAAAACTGGGCCAAGACTGTTATATGTGGACGAGCCAGGCTGGGTGGCATTCCTATTGGCGTGATCACTGCAGAAACACGTGCAGTTGAAGTGGTGATACCAGCTGATCCTGGAAATCCTGAATCTGATACCAAGATCAACCCACAAGCTGGCCAAGTGTGGTACCCAGACTCCGCTTTCAAGACCGCGCAAGCCATCCGGGACTTCAGCAAAGAGCAACTGCCATTGATAATCTTTGCTAACTGGCGTGGCTTCTCTGGTGGTATGATGGACATGTATGACGCTATACTTAAGTACGGTTCGTACATCGTGGATGCACTACGCGAATATAAGCAGCCTGTGTTTGTGTATTTACCGCCTCACGGAGAACTGCGTGGAGGGGCCTGGGTCGTAGTGGATCCCACTATTAACCCAGAAGTCATGGAAATGTACGCTGACGAGAAGAGCAGAGGAAATGTGCTTGAGCCCTCGGGTACGGTAGAGATTAAATTCCGTAAGAAGGACCTGGTGAAAACGATGAGACGTATTGATAGTAAATACGTGCAGTATTCACAGGCTCTCGCATCACCTGATCTTACAGACACGCAACGTAAAGACCTCGAAAGAAAGCTGAAAGAAAGAGAAGACGAGCTCGTCCCCACGTATCAACAGGTTGCTTCTCAGTTCGCTGATCTTCACGACACTCCTGGACGCATGCTGGAGAAGGGTGTCATTAGTGACATAATCAAGTGGAAACAGTCGAGGAAGTTCTTCTACTGGAGATTGAAACGTATCTTGATGGAACGACGTGTCAAAGAACTCTTGTGTAACGCTAACTGTGACATCTCGTCTGGACAGCTAAATTCTACCATGGAGAGACTATTTCTTGAAGCTCATGGAAGTTCAAAGTCATACTTGTGGTCAGACAACGAGATTGTTGCCGAGTGGCTGGAGAAGGACTTGAGTCCGGAGAATAAAGAGTCTGTAATCAGTGAGAACATCAAGTGGATCAAGAGAGATCGTGTCCTTAGGAACATCAAGAACCTTGTTCAAGAGAACCCAGAAATCGCCATGGACTCCATTGTACACATCACGCAACAAATGAACTCAATCAAGAGGACTGAACTGTCACGCATTCTTCAGAACCTCGATGCTAAGACCGAGGACTCGGGATCCCAAATTTGA

Transcript

gene27922.t1

CTGGCGCTGTGCTGGAGCCTGGAACAGTTGTAGCTACTCTTGAGCTGGACGACCCAAGTCAAATTACTCAGGCCAAGAACTACCATGAACCTTTCCCAGAAGCCACTGAGTGCATCAAAGAGAAAGGAGATAAACGTCATCAGGTTTACCAGCGAACATATGAGACGCTACAACATATCATGGATGGTTATTGTATTGATGAACCTTACTTTAATGAACAAGCCAAAGCACTTGTACAAATGTTGTTACTTTGTTTGAAAGACCCTTCATTGCCGTTGTTACAACTACAGGAAATGTTGGCATCCATATCTGGTCGAATCCCACCCTCTGTAGAAGAATCCATCAAGAAACACCTTGCTAACTATGCCAGCAACCTGACATCGTTACTCAACCAATTCCCTAGTCAACAAATTGCCAATGTAGTGGATGCTCATGCCGCCACCTTAACAAAGAGAGAAGAGAGAGACGCCTTCTTTCTGAATACACAATTAATTGTACAATTAGTACAAAAGTATCGTAATGGTGTACGTGGTCATCTCAAAGCTGTAGTTCTTGGACTGTTAAGACAGTACCTACAAAATGAGGTCTTGTTCAGTGAAGGTACACAAATTATAACAAATTTTGAGATCCTTATTACAATGATGATGATGATGGTGATGATGATGGTGACGATGATGGTGATGATGATGATGATGGTGACGATGATGATGATGATGGTGATGATGATGATGGTGATGATGATGATGGTGATGATGATGGTGACGATGATGATGACGATGGGTGATGACGATGGTGATGGTGATGGTGATGGTGATGATGTTGATGATGATGACGATGATGATGATGATGATGACGACGACGACGACGACGACGATGATGGTGACGATGATGGTGACGATGATGATGGTGATGATGATGGTGGGAATTTTGAGAAATGCATTACGCTTCTCCGCGACAAACACAAGAAAAGCGACCTTGCCTTTGTCATCTCCTCTGTGTTTTCTCACGCCAATGTTGCCAAGAAGAACACCCTGACTATCTTTCTCATCGACCATTTATGTGGCCGTGAAGCTGGACTTTCTGATGAACTTAAAGAATTGCTGCAGGATCTAACATCACTGAACAGACCTGAGCATTCTAAGGTTGCACTGAGGGCCAGACAAGCTCTGCTGGCCTCACAACAGCCATCCTATGAACGACGTCACAATCAAATTGAATCATTATTCCTGTCAGCGGTTGACATCATGGGGAACCAGGCTGCTCCAGAAAACCTTCAAAAACTCATCCTCTCTGAGACAGCAATATTTGACATGCTTCCAAGTTTCTTCTATCATTCCAATGATGCTGTGAGAACAGCAGCGCTAGAGGTATATATTCGACGTAGTTATCAAGCGTACGAGCTCCATACTCTATACCATGATCAGCTTGTGGGGAATGTATCCATTGTGGAGTTTCAGTTTTCTCTGCCAAGCAATCATCCCCACTGGACACAAAACAAAGTTCCATCAAGCAAGACCGTCCTGGCTATGCCAAGGGTTCGCAGTCTTAGTGAAGACCTGTTTGGCCTGGTTTATCATCAGACATTACCTTGTAGTCGTACTGGCATAATGGCTGCTTTTGCATCAATAAAAGAACTAGATAAGAATTTTCATCTTGTCATGGATAGGTTCCAGGCCTCCACCGAGGTTGTACCACGGTCAGCAAAACCCTTCAAAAGGGTGGGGTCTCTGTCGTCATATGATGAAATTAGGCAGCATGCACAGTACAAGCAGTGTGAAGAAGAACCTATCCATATTGTCAACGTTGCTGTTCTCATCGGAAACAACCAGGATATAGAAGAATGCCAGAAACATGTCAGTGAGTTCACGAATTCCAAGAAAGCGATTCTCAAGGAGAAAGCAATTCGTCGCATCACTTTTTTGATGTGCGATGGAAAGGGGGGATTCCCGTGGTTCTTCACGTTCCGTGCCAATGATAACTTTGAGGAAGATAAAATCTACCGCCATCTTGAACCTGCTCTTGCCTTCCAACTTGAAATTAATCGTCTCAGGAATTTTGACTTAGATCTTATTCCAACTACCAATCATAATATTCACCTGTACTTTGGTTCTGCCAAGAAGCTATCCAACAACACTGAAGTGACAGACTACCGTTTCTTTATTCGTACCATAATCAGACATTCTGATTTCGTAACCAAGGAAGCGTCGTTTGAGTACATGGAGAAAGAAAGCGAGATCCAACTGTTGGAGGCTTTGGATCAGATGGAAGTGTTCTTTTCTGAAAGTCCCAAGAGAACGGACTGTAACCACATCTTTTTACACTTTGTTCCTTGTGTTATCATTGAACCTGACAGGATTGAGGAGAGTATTCGTCACATTGTCATGCGATATGGTCGTAGACTGTGGGCTTTAAGAGTTCTAAAAGCAGAGATTAAAGTCAATATCAGGCTTACCCCTACAGGAGTCATCACTCCACTACGAATGCTCATCTCTAATGAGTCTGGTTACTACCTTGACTTCTGTACCTACAAGGAAGTAGTTGACCCACAAACAGGAGAGAGAGTATTTGAGACATATGGTCCAAAGAGAGGTCCTTTTCATGGGCTACCAACGTCAACCCCTTACGTGACTAAAGACCATTTACAATTGAAGCGATTCAGAGCTCAGTCCTTGAGCACTACCTACGTGTATGATTTCCCAGAGCTCTTCAGACAGGCAATTATCAAGATGTGGAAGAAGTTTGCCAAGTACTCCCCTGAAGAAGTCCAACTACCACGTAACGTGATGAATGTTACTGAGTATGTTTTGGATGGAAACAATAAGTTGGAGGCGATTTCACGTGTGTCTGGAGAAAACACGTCCGGCATTATTGTATGGAAGATCGAGTGTTGTACTCCAGAATGTTATCCTGCAAAGCGAGAGTTCATTATCGTAGCCAATGACATCACACACATGATTGGATCGTTTGCTACTGAAGAGGACATGCTATTTAAGCGTGCGTCTGAGATGGCTCGTGCCAAAGGAATCCCACTGGTGTACATATCAGCCAACAGTGGTGCACGTATAGGCGTGGCTGAGGAAGTTAGACACTTGTTCAGGGTGGCTTGGAATGACAAAAATGCACCTGAAAAGGGCTTCAAGTACATCTATGTTACTCCAAGCGAATTTAAGAAGCTTAGTGCAACCAATTCAATCCATGCCGAACATATACAAGACGATGGAGAAGATCGCTACAAAATAACCGATATACTAGGTAGTGAAGATGGTATCGGTGTAGAAAACCTCAGGGGTTCAGGGATGATCGCAGGGGAGATGTCTGCTGCTTACAACGAAATCGTTACCATCAGTCTGGTAACGTGCCGTGCAGTTGGAATTGGTTCGTATCTTGTCCGTCTTGGTCAGAGAGTCATTCAGACAGAAAATTCACATTTGATTCTCACTGGATACAATGCCTTGAACAAGGTTCTTGGTCGTCAAGTTTACAGCTCCAACCTGCAACTTGGAGGACCACAAATCATGCACAATAATGGTACTTCACATCTTGTCGTACAAGACGATTTTAGCGGCGTCGCTGCAGTGATGGAGTGGCTTGCATTTGTGCCAATGGTTCACAATGGACCTTTGCCAATACTTAAAACACGGGATCCTATCGACAGAGATGTGGAGTTCCTTCCAACCAAGGCACCTTACAATCCTAGACATTTTATATGTGGCTGTCCTAATCCTGAGAAACAAGAACAGTGGATCAGTGGATTTTTTGACAAGGACTCGTTCGTTGAAACCATGGAAAACTGGGCCAAGACTGTTATATGTGGACGAGCCAGGCTGGGTGGCATTCCTATTGGCGTGATCACTGCAGAAACACGTGCAGTTGAAGTGGTGATACCAGCTGATCCTGGAAATCCTGAATCTGATACCAAGATCAACCCACAAGCTGGCCAAGTGTGGTACCCAGACTCCGCTTTCAAGACCGCGCAAGCCATCCGGGACTTCAGCAAAGAGCAACTGCCATTGATAATCTTTGCTAACTGGCGTGGCTTCTCTGGTGGTATGATGGACATGTATGACGCTATACTTAAGTACGGTTCGTACATCGTGGATGCACTACGCGAATATAAGCAGCCTGTGTTTGTGTATTTACCGCCTCACGGAGAACTGCGTGGAGGGGCCTGGGTCGTAGTGGATCCCACTATTAACCCAGAAGTCATGGAAATGTACGCTGACGAGAAGAGCAGAGGAAATGTGCTTGAGCCCTCGGGTACGGTAGAGATTAAATTCCGTAAGAAGGACCTGGTGAAAACGATGAGACGTATTGATAGTAAATACGTGCAGTATTCACAGGCTCTCGCATCACCTGATCTTACAGACACGCAACGTAAAGACCTCGAAAGAAAGCTGAAAGAAAGAGAAGACGAGCTCGTCCCCACGTATCAACAGGTTGCTTCTCAGTTCGCTGATCTTCACGACACTCCTGGACGCATGCTGGAGAAGGGTGTCATTAGTGACATAATCAAGTGGAAACAGTCGAGGAAGTTCTTCTACTGGAGATTGAAACGTATCTTGATGGAACGACGTGTCAAAGAACTCTTGTGTAACGCTAACTGTGACATCTCGTCTGGACAGCTAAATTCTACCATGGAGAGACTATTTCTTGAAGCTCATGGAAGTTCAAAGTCATACTTGTGGTCAGACAACGAGATTGTTGCCGAGTGGCTGGAGAAGGACTTGAGTCCGGAGAATAAAGAGTCTGTAATCAGTGAGAACATCAAGTGGATCAAGAGAGATCGTGTCCTTAGGAACATCAAGAACCTTGTTCAAGAGAACCCAGAAATCGCCATGGACTCCATTGTACACATCACGCAACAAATGAACTCAATCAAGAGGACTGAACTGTCACGCATTCTTCAGAACCTCGATGCTAAGACCGAGGACTCGGGATCCCAAATTTGACTACGTCACTAATTGTCACGTAACTGTTGTCACGCATTCTTCAGAACTTCGATGACAAGTTAAGACCGATGATGTCATGAATTACCGACGTCCCTAAGTCCTTTAAAAGAGTCGAACCGAGAACTCAGGGATTTTAAGACCGACACTGGATTGTAAACACTTATGAACTGAAGATATTTGTGACACCACTTACTGAACAACGCGAATTACCGTTGGACCAGAACTCTCATATTCCTAGTAAAAACTGGAAGCGTAAATTCACACATGATGATTGTCGGTGCAGTCTAGGGAAACTGGTACCGACATGATTTAGTGGAACCGGAAGTAAATGAAAAATGGAAATGTCAATATTTTCCTTTTATGTAGGAACCCATAGAGAAACTATTTGAAATAATGCGATAGGTATTCTACGAATTGGCTATCTATCAAATAAGCACAAGTTCATATATCTGGGATAGAATTGGTTGGCTACGTGAATCAGTAGGATCGTTTAGGCCCGTGTCGTTCGACTGTGCGTCGATAAAAGGGCTCTGTCACGAGCTGCGCACGTGATGTCAAAAATTTGCATAAATTAAAATTCGTAAAAAAACGATAAATTTAGGCTGAACTTTTCATATGGTGTAGTGACAGAGCCCCTTTAAATATCTTTTCGATCAAGGAGATCGAAAATCATCCAGTTCGTCAATAATTTCGACATTCAATTTCTGAATTATTTTTATTTTTGAGCAGTCGATAACAATTACTTTAAATATAAATATTTAATAATATCAAGATTAAATTATCATTAATTCGTAGCGAAACAAATCATTATTCTTCTAAATGGTCAATATTTTGATAGCCTCCGACACGCTTAGATTTCCTGTGTTTAAGAGGTCTCTCTCTTACTAGAAACACAGGCAACCCAACATAAAAAGTACTGCGGAGATACAAATTAATTTATTGGGCAATTGTGTAAACTAGAGTACAAACACTAAAAGCGTGAAACAGTACTAACTAAATAGTACTATTTCGATTTCGATTCTATTATTTTCTATAGTACTATTTAATTAGTACTGTTTCACGCTTTTAGTATTAGTACTCTATACATATTTGTATACATAAACTTATGCTTCATTTTGATCGAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01039	Carboxyl_trans	Carboxyl transferase domain	Family	Interproscan
PF08326	ACC_central	Acetyl-CoA carboxylase, central region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011762	Domain	Acetyl-coenzyme A carboxyltransferase, N-terminal	Interproscan
IPR011763	Domain	Acetyl-coenzyme A carboxyltransferase, C-terminal	Interproscan
IPR013537	Domain	Acetyl-CoA carboxylase, central domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR034733	Domain	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Interproscan
IPR049076	Family	Acetyl-CoA carboxylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45728	ACETYL-COA CARBOXYLASE, ISOFORM A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003989	Molecular Function	acetyl-CoA carboxylase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016874	Molecular Function	ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-