Detailed information of gene27791.t2 in Actinoscyphia liui

Genomic Location: chr9:3741335...3785222
NR annotation: XP_031569013.1, small subunit processome component 20 homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75691Small subunit processome component 20 homolog OS=Homo sapiens OX=9606 GN=UTP20 PE=1 SV=3
Q5XG71Small subunit processome component 20 homolog OS=Mus musculus OX=10090 GN=Utp20 PE=1 SV=2
O60055U3 small nucleolar RNA-associated protein 20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp20 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20416UTP20_CU3 small nucleolar RNA-associated protein 20, C-terminalDomainInterproscan
PF07539UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR046523DomainU3 small nucleolar RNA-associated protein 20, C-terminalInterproscan
IPR052575FamilySmall subunit processome component 20Interproscan
IPR011430DomainU3 small nucleolar RNA-associated protein 20, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14772UTP20; U3 small nucleolar RNA-associated protein 20-Ribosome biogenesisko03009deepkoala

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