Gene detail

Detailed information of gene27308.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene27308.t1	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	chr8	21071376	21090439	+

Gene Structure

More details in Jbrowse Sequence

CDS

gene27308.t1

ATGTCATCTTGGATTATAATTTTTACTGTTGTACTGAACTTCTTAGCCTTAGAGGTAGCTTATGGACAATTCTGTGAGACAGAGAGTTGCGGATCTTTGGAGAAAGAAGGACATCTTAAGGCCTTTGGAGACCACCGCCCACCTCAAGGTGGCATAAAAACTCTTAAATACTCCCCTAGCAGTGCAGACTTTTATCGCCGCTTTGTTCATGGTAGAACACCTGTCCTCATCAGAGGTGCAGCCAATCACTGGCCAGCAATGACTCGATGGACCAACCAATCATATTTAAGAGAACACTACGGCTCTACCCCTTTCACTGTGGAATACCGTAAAAAATTCAAAAACGAACAACCAATCAGGAAGCCTCTCAGACTTGATAAATTTTTAGATATTTATGAGACTGAAAACGTGTACTTAGACTCAACGTTTCCTCCAAGTGCCATGCTTCATGATGTTATCCTGCCACAGTTTCTTGCCTGCAAGGAGTTGAGTTCCAAGGTGAACAGTATGACGCTCTTGTTGAGCAACGGCAACACGACTTCTCCGATCCACCAAGATGGATACGAGAATGTCATAACTGTGATATCAGGGATCAAGACCTTCATCTTGATAGATCCTGCGTACTCGGAGGATCTTTACGCAGATGAACATTTCTTGTTTGCTGGGATTTTGTCGTTTAATGGTGACGCGGTGGACTTTGCGAAATTCCCCAACCTGGCTAAGGTACCTTATTATGAGGTTACATTATACCCAGGTGACATGTTGTACGTCCCACAGTACTGGTGGCATCTCGTGCGATCCAAGGACTCGCCCAACATTGCTGTCAACTTTTGGCTCGATGTTTTTAACTTTCAAAATGAATTTGAAGAAGCTGGGTTAGATGAAGAGAAGGATATCGTCAAGATAAATGCCAAGTTTGATGAATTAGTCAAACAACAGCCTGAAAGCATTCGATGTGACAACGAGAACCCTCAACTGAACAAGATACTAAAGGTCAACATGAGTGATCCTTTTTCTTCCTTTCTACGTATACCTAAAAAAAGTGAACCTCCGCCCGATGTACTTCTGGCCAGCGGTTATACTATGCCTGTCTTGGGGTTTGGTACATTTGCATTAAGAGATACAGTGAGTTCAGTCAAGACTGCGATTGAAGCAGGATATAGACTTATAGACACAGCCCAAGGATACCCTGGCTCAGAAGAGTCGATTGGCAAGGCAATTCAAGAGAGTAATGTCCCTCGTGAGAATATTTTCATCGTGACTAAACTCCACCCAAAATACCTTGGCTACGACACAACTCTCAGTGCTATAGAGCTGTCCTTAAAAGCGTTACAAACTGACTACATTGACTTGTTTCTGATCCATACGAAAGTGTGTGACAATCTGGCGCTGACGTGTGGGGAAGGAGAGCCAAAAGGTGACTGGAAGGACAGCTGGAGAGCGATGGAAGAGATGCAAAGAAAGGGTAAAATCAGGAGTCTTGGAGTGAGCAATTTCAAAAGAGAAGAAGTGGAAGAGTTAGTCGAGTTTGCTGTGCTACCCGTGTCTGCCGTACAGAATTGGTTCGATCCCTTCCACCAGGAGAGAAAAACAAGACACTTCTGCAGCAAGAATAATATTCGTTATATCGGCTACTCAACCTTAGGTACGCGTTGGGTGTACATGTTTGGTTTGGCCAAAAATCCTGTCCTTAAATCATCGATTATTAACGAAATCAGCTATCACTACGAGTATGTCGCTACTCAGGTGGTTCTACGCTGGGCTATCCATATGAATGTAACTGTAATACCACGTTCTAACAGCCCAAGAAACATTCATCTGAATTACCGCACTTTGGATCTGAATCTTACTGAATCAGAGATCGATTTGATTACGAACATCGTAGACTACGAGTTTCACCCCCTGGAAAGAGTTGAACGTGGCGAGGGTAATTGCAATGATGTCGATGACACTTGCCAGCAACGAGCTAAAGAGGGAGAGTGTGTCAGTAACTCTGCGTGGATGTTGGACAACTGTAAAAACAGTTGCAAATTGTGCTATGATAATACCAATTCCTTTTTTAAATCGTACGTGTATGTGGGGTCAGAAGATCAACACATGTACGCCATTGATACCCTGAGCGGCGCCATTGAGTGGAAGTTCCCAACCCAAGGCAAGATTCTGTCCACCGCTGCAATGAGCCCTGATAGTGAGAAGCTTTATTTCGGGTCCAATGACGGCAACGTCTACGCTCTTCAAGCCGTCACAGGAAAATTGCTCTGGAGTTTTCAAGCGAAAGCTGGGATCGTCGCTGGCCCCCGAATATCGACCTCAGGGACCATATACGTTGGTTCACACGATGGGTTCCTTTATGCCCTTGACCCGTCAGCAAATGGGTCTCTTATTTGGAGAAAGAGCCTCGGAGGTCCTATATTCAGTAGTGTTGCCATAGGCGAAGAGAAAGGTGCCCTGTATGTAGGGGACGCTGCTGATAATGGACCTAGGATATTCGGTCTGAGCGCTAAAACGGGCGATATCTTGTGGGAGTTTTCAAAGGCTGGAAAAATCATGTCTTCGCCAGCTTTGAGCTCTGATGGAAAGACTGTGTATTTCTGTTCTCTGGATCACTTTATATACGCACTCGATACCGACACAGGTAGCCCGGTATGGTCATTGGACACAGGTTCTGAGATGGAGTCATCTCCATACATCAGTAAATCAGACGGTACTCTTTACGTCGGTCTTATCACCGAAAAGTTGCTTGCCGTGAACACCCTTGCTGGTCCGCTGAGAGGAACGGTGAAGTGGTCGTTAAATACTGGTGGAGAAGTCGTGTCATCGCCTGTTGTTACTGAAAATGGCACGATCTACGTCGGTGTTGGAGATGGTCGCATTCTTGCCATCAACCAAACTTCATCGGAAATCATCTGGGGCCCAGCCACTAACGACTACGTTGCATCATCAGTAGCCGTTGGCAGCGATTCAGTTGTCTATGCCGGCAGCACGGACAATACAGTTTACGCATTAAACGGACAAGACGGTAGTATCGTGTGGAAAGTTAAGACCAACGGTTCTATAAGTCAATCGTCGCCTGTTCTCCCGCGTAACGAACGGATGGCTCTAGGGTAA

Transcript

gene27308.t1

CTCTAATCCAGCTGCTTAGAATGAATTGCTATTCATAAATTGGATAACCTATGGTTTAGATATACGTTGCACTTGTCGATTGAGTTCGTTTTTTCGACGCTTTGTGGCCGTTCTGTCTAGTAAGCCATTCAAGCGCTGTCAACCGGTCGAAGAAAGCATATTTCTGCTCAGCCGGTTCAAGAAAGCAATAACAATGTCATCTTGGATTATAATTTTTACTGTTGTACTGAACTTCTTAGCCTTAGAGGTAGCTTATGGACAATTCTGTGAGACAGAGAGTTGCGGATCTTTGGAGAAAGAAGGACATCTTAAGGCCTTTGGAGACCACCGCCCACCTCAAGGTGGCATAAAAACTCTTAAATACTCCCCTAGCAGTGCAGACTTTTATCGCCGCTTTGTTCATGGTAGAACACCTGTCCTCATCAGAGGTGCAGCCAATCACTGGCCAGCAATGACTCGATGGACCAACCAATCATATTTAAGAGAACACTACGGCTCTACCCCTTTCACTGTGGAATACCGTAAAAAATTCAAAAACGAACAACCAATCAGGAAGCCTCTCAGACTTGATAAATTTTTAGATATTTATGAGACTGAAAACGTGTACTTAGACTCAACGTTTCCTCCAAGTGCCATGCTTCATGATGTTATCCTGCCACAGTTTCTTGCCTGCAAGGAGTTGAGTTCCAAGGTGAACAGTATGACGCTCTTGTTGAGCAACGGCAACACGACTTCTCCGATCCACCAAGATGGATACGAGAATGTCATAACTGTGATATCAGGGATCAAGACCTTCATCTTGATAGATCCTGCGTACTCGGAGGATCTTTACGCAGATGAACATTTCTTGTTTGCTGGGATTTTGTCGTTTAATGGTGACGCGGTGGACTTTGCGAAATTCCCCAACCTGGCTAAGGTACCTTATTATGAGGTTACATTATACCCAGGTGACATGTTGTACGTCCCACAGTACTGGTGGCATCTCGTGCGATCCAAGGACTCGCCCAACATTGCTGTCAACTTTTGGCTCGATGTTTTTAACTTTCAAAATGAATTTGAAGAAGCTGGGTTAGATGAAGAGAAGGATATCGTCAAGATAAATGCCAAGTTTGATGAATTAGTCAAACAACAGCCTGAAAGCATTCGATGTGACAACGAGAACCCTCAACTGAACAAGATACTAAAGGTCAACATGAGTGATCCTTTTTCTTCCTTTCTACGTATACCTAAAAAAAGTGAACCTCCGCCCGATGTACTTCTGGCCAGCGGTTATACTATGCCTGTCTTGGGGTTTGGTACATTTGCATTAAGAGATACAGTGAGTTCAGTCAAGACTGCGATTGAAGCAGGATATAGACTTATAGACACAGCCCAAGGATACCCTGGCTCAGAAGAGTCGATTGGCAAGGCAATTCAAGAGAGTAATGTCCCTCGTGAGAATATTTTCATCGTGACTAAACTCCACCCAAAATACCTTGGCTACGACACAACTCTCAGTGCTATAGAGCTGTCCTTAAAAGCGTTACAAACTGACTACATTGACTTGTTTCTGATCCATACGAAAGTGTGTGACAATCTGGCGCTGACGTGTGGGGAAGGAGAGCCAAAAGGTGACTGGAAGGACAGCTGGAGAGCGATGGAAGAGATGCAAAGAAAGGGTAAAATCAGGAGTCTTGGAGTGAGCAATTTCAAAAGAGAAGAAGTGGAAGAGTTAGTCGAGTTTGCTGTGCTACCCGTGTCTGCCGTACAGAATTGGTTCGATCCCTTCCACCAGGAGAGAAAAACAAGACACTTCTGCAGCAAGAATAATATTCGTTATATCGGCTACTCAACCTTAGGTACGCGTTGGGTGTACATGTTTGGTTTGGCCAAAAATCCTGTCCTTAAATCATCGATTATTAACGAAATCAGCTATCACTACGAGTATGTCGCTACTCAGGTGGTTCTACGCTGGGCTATCCATATGAATGTAACTGTAATACCACGTTCTAACAGCCCAAGAAACATTCATCTGAATTACCGCACTTTGGATCTGAATCTTACTGAATCAGAGATCGATTTGATTACGAACATCGTAGACTACGAGTTTCACCCCCTGGAAAGAGTTGAACGTGGCGAGGGTAATTGCAATGATGTCGATGACACTTGCCAGCAACGAGCTAAAGAGGGAGAGTGTGTCAGTAACTCTGCGTGGATGTTGGACAACTGTAAAAACAGTTGCAAATTGTGCTATGATAATACCAATTCCTTTTTTAAATCGTACGTGTATGTGGGGTCAGAAGATCAACACATGTACGCCATTGATACCCTGAGCGGCGCCATTGAGTGGAAGTTCCCAACCCAAGGCAAGATTCTGTCCACCGCTGCAATGAGCCCTGATAGTGAGAAGCTTTATTTCGGGTCCAATGACGGCAACGTCTACGCTCTTCAAGCCGTCACAGGAAAATTGCTCTGGAGTTTTCAAGCGAAAGCTGGGATCGTCGCTGGCCCCCGAATATCGACCTCAGGGACCATATACGTTGGTTCACACGATGGGTTCCTTTATGCCCTTGACCCGTCAGCAAATGGGTCTCTTATTTGGAGAAAGAGCCTCGGAGGTCCTATATTCAGTAGTGTTGCCATAGGCGAAGAGAAAGGTGCCCTGTATGTAGGGGACGCTGCTGATAATGGACCTAGGATATTCGGTCTGAGCGCTAAAACGGGCGATATCTTGTGGGAGTTTTCAAAGGCTGGAAAAATCATGTCTTCGCCAGCTTTGAGCTCTGATGGAAAGACTGTGTATTTCTGTTCTCTGGATCACTTTATATACGCACTCGATACCGACACAGGTAGCCCGGTATGGTCATTGGACACAGGTTCTGAGATGGAGTCATCTCCATACATCAGTAAATCAGACGGTACTCTTTACGTCGGTCTTATCACCGAAAAGTTGCTTGCCGTGAACACCCTTGCTGGTCCGCTGAGAGGAACGGTGAAGTGGTCGTTAAATACTGGTGGAGAAGTCGTGTCATCGCCTGTTGTTACTGAAAATGGCACGATCTACGTCGGTGTTGGAGATGGTCGCATTCTTGCCATCAACCAAACTTCATCGGAAATCATCTGGGGCCCAGCCACTAACGACTACGTTGCATCATCAGTAGCCGTTGGCAGCGATTCAGTTGTCTATGCCGGCAGCACGGACAATACAGTTTACGCATTAAACGGACAAGACGGTAGTATCGTGTGGAAAGTTAAGACCAACGGTTCTATAAGTCAATCGTCGCCTGTTCTCCCGCGTAACGAACGGATGGCTCTAGGGTAAACTTAAACTTAAACTAGACGAAATCTAACTCCATCCAAGGCAGCTTACTATACTGGCCCCAGTTCTTAGAAGGCCGATCGATTGGTCTTAATCCACGGTTAAAAGGTTTAATCATAGAGCAGAACCCTACCGTACCGTGACACTTAAATGGCTTCCGCTCTGAACCAATCACAATGCACAAAAACACAAACCGACCAATCACGAGCGGAAGCCATTTAAGTGTCACGGTACGGTAGGGTTCCCACTCATACGAAATCTGCTTTAGTTTAGTGCTACTGAGCAATCGCGACCTTTCAGGAACTCGATCAGCCCTGTTAAAAGTGCGATTAAGTTTAGAGCAGTTTTCGTATGACTATAAAAAATTCCGTTCGTTATAACGAACCCCCCTTATAACGAACCATTATTTCACCCCATCAAACAGTAACTACATGGTTTTTAAAAATTAACCCCGATATAACGAACTCGAACCCGTTATATCGAAGTTCCAATCCCGGGGGGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00248	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan
PF01011	PQQ	PQQ enzyme repeat	Repeat	Interproscan
PF13360	PQQ_2	PQQ-like domain	Repeat	Interproscan
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002372	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR003347	Domain	JmjC domain	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR018170	Conserved_site	Aldo/keto reductase, conserved site	Interproscan
IPR018391	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR020471	Family	Aldo-keto reductase	Interproscan
IPR023210	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR036812	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43827	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-