Detailed information of gene27279.t1 in Actinoscyphia liui

Genomic Location: chr8:20589395...20592853
NR annotation: XP_020900464.1, ski oncogene [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P17863Transforming protein Ski OS=Avian erythroblastosis virus (strain Sloan-Kettering) OX=11862 GN=V-SKI PE=1 SV=1
P49140Ski oncogene OS=Gallus gallus OX=9031 GN=SKI PE=1 SV=1
P12755Ski oncogene OS=Homo sapiens OX=9606 GN=SKI PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02437Ski_SnoSKI/SNO/DAC familyFamilyInterproscan
PF08782c-SKI_SMAD_bindc-SKI Smad4 binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037000Homologous_superfamilySki-like, DNA-binding domain superfamilyInterproscan
IPR023216FamilyTranscription regulator SKI/SnoNInterproscan
IPR003380DomainSKI/SNO/DAC domainInterproscan
IPR010919Homologous_superfamilySAND-like domain superfamilyInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR014890Domainc-SKI SMAD4-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10005SKI ONCOGENE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030514Biological Processnegative regulation of BMP signaling pathwayInterproscan
GO:0046332Molecular FunctionSMAD bindingInterproscan

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