Detailed information of gene27099.t1 in Actinoscyphia liui

Genomic Location: chr8:17736263...17782381
NR annotation: XP_031556839.1, uncharacterized protein LOC116293538 isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CG65SCO-spondin OS=Mus musculus OX=10090 GN=Sspo PE=2 SV=2
Q700K0SCO-spondin OS=Rattus norvegicus OX=10116 GN=Sspo PE=2 SV=1
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan
PF08685GONGON domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR003582DomainShKT domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR001007DomainVWFC domainInterproscan
IPR011658DomainPA14 domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06825FBN1; fibrillin 1-Glycosaminoglycan binding proteinsko00536deepkoala

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