Detailed information of gene27094.t1 in Actinoscyphia liui

Genomic Location: chr8:17679320...17689278
NR annotation: XP_028514358.1, extracellular matrix protein FRAS1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2
P35448Thrombospondin-1 OS=Xenopus laevis OX=8355 GN=thbs1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR051171FamilyCalcium/Cation AntiporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0030001Biological Processmetal ion transportInterproscan

TOP