Detailed information of gene27092.t1 in Actinoscyphia liui

Genomic Location: chr8:17619901...17628655
NR annotation: KXJ27223.1, Semaphorin-5B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2
P07996Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2
P35441Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP